RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 MYPNQ86TC9 1320 aa28.56■■■□□ 2.16
CLK2-201ENST00000355560 FRMD3A2A2Y4 597 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 DDX39AO00148 427 aaKnown RBP28.55■■■□□ 2.16
CLK2-201ENST00000355560 ATP2A1O14983 1001 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 EYA4O95677 639 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 MTMR1Q13613 665 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 HERC4Q5GLZ8 1057 aaPredicted RBP28.55■■■□□ 2.16
CLK2-201ENST00000355560 MYOCDQ8IZQ8 938 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 TC2NQ8N9U0 490 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 PDCD2LQ9BRP1 358 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 JADE2Q9NQC1 790 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 ADKP55263 362 aaKnown RBP28.55■■■□□ 2.16
CLK2-201ENST00000355560 ARHGEF16Q5VV41 709 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 FAM114A1Q8IWE2 563 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 REEP2Q9BRK0 252 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 TMX1Q9H3N1 280 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 ZHX3Q9H4I2 956 aa28.55■■■□□ 2.16
CLK2-201ENST00000355560 ITIH6Q6UXX5 1313 aa28.54■■■□□ 2.16
CLK2-201ENST00000355560 MYCLP12524 364 aaPredicted RBP28.54■■■□□ 2.16
CLK2-201ENST00000355560 GIT2Q14161 759 aa28.54■■■□□ 2.16
CLK2-201ENST00000355560 PIGOQ8TEQ8 1089 aa28.54■■■□□ 2.16
CLK2-201ENST00000355560 CDCA5Q96FF9 252 aa28.54■■■□□ 2.16
CLK2-201ENST00000355560 CNOT6LQ96LI5 555 aaKnown RBP28.54■■■□□ 2.16
CLK2-201ENST00000355560 FGFBP2Q9BYJ0 223 aa28.54■■■□□ 2.16
CLK2-201ENST00000355560 PCDHA2Q9Y5H9 948 aa28.54■■■□□ 2.16
CLK2-201ENST00000355560 LRRC63Q05C16 580 aa28.54■■■□□ 2.16
CLK2-201ENST00000355560 PLS1Q14651 629 aa28.54■■■□□ 2.16
CLK2-201ENST00000355560 EPHA7Q15375 998 aa28.54■■■□□ 2.16
CLK2-201ENST00000355560 TREML2Q5T2D2 321 aa28.54■■■□□ 2.16
CLK2-201ENST00000355560 AGO4Q9HCK5 861 aaKnown RBP28.54■■■□□ 2.16
CLK2-201ENST00000355560 USP27XA6NNY8 438 aa28.53■■■□□ 2.16
CLK2-201ENST00000355560 NF2P35240 595 aa28.53■■■□□ 2.16
CLK2-201ENST00000355560 ZC3H15Q8WU90 426 aaKnown RBP28.53■■■□□ 2.16
CLK2-201ENST00000355560 ELP3Q9H9T3 547 aa28.53■■■□□ 2.16
CLK2-201ENST00000355560 UBXN1Q04323 297 aa28.52■■■□□ 2.16
CLK2-201ENST00000355560 PPFIBP1Q86W92 1011 aa28.52■■■□□ 2.16
CLK2-201ENST00000355560 RUSC1Q9BVN2 902 aa28.52■■■□□ 2.16
CLK2-201ENST00000355560 LGALS16A8MUM7 142 aa28.52■■■□□ 2.16
CLK2-201ENST00000355560 MUTP22033 750 aa28.52■■■□□ 2.16
CLK2-201ENST00000355560 ITGB3BPQ13352 177 aaPredicted RBP28.52■■■□□ 2.16
CLK2-201ENST00000355560 CEP135Q66GS9 1140 aa28.52■■■□□ 2.16
CLK2-201ENST00000355560 OTUD5Q96G74 571 aa28.52■■■□□ 2.16
CLK2-201ENST00000355560 C16orf45Q96MC5 204 aaPredicted RBP28.52■■■□□ 2.16
CLK2-201ENST00000355560 TUBGCP2Q9BSJ2 902 aa28.52■■■□□ 2.16
CLK2-201ENST00000355560 ACAD9Q9H845 621 aa28.52■■■□□ 2.16
CLK2-201ENST00000355560 PES1O00541 588 aaKnown RBP28.51■■■□□ 2.15
CLK2-201ENST00000355560 DHX15O43143 795 aaKnown RBP28.51■■■□□ 2.15
CLK2-201ENST00000355560 PRKCSHP14314 528 aaPredicted RBP28.51■■■□□ 2.15
CLK2-201ENST00000355560 KCNJ6P48051 423 aa28.51■■■□□ 2.15
CLK2-201ENST00000355560 RBL2Q08999 1139 aa28.51■■■□□ 2.15
CLK2-201ENST00000355560 GPR162Q16538 588 aa28.51■■■□□ 2.15
CLK2-201ENST00000355560 TMEM139Q8IV31 216 aa28.51■■■□□ 2.15
CLK2-201ENST00000355560 LXNQ9BS40 222 aa28.51■■■□□ 2.15
CLK2-201ENST00000355560 WRAP73Q9P2S5 460 aaPredicted RBP28.51■■■□□ 2.15
CLK2-201ENST00000355560 R3HCC1Q9Y3T6 440 aaKnown RBP28.51■■■□□ 2.15
CLK2-201ENST00000355560 AKR1B15C9JRZ8 316 aaPredicted RBP28.51■■■□□ 2.15
CLK2-201ENST00000355560 E4F1Q66K89 784 aaPredicted RBP28.51■■■□□ 2.15
CLK2-201ENST00000355560 MOB2Q70IA6 237 aa28.51■■■□□ 2.15
CLK2-201ENST00000355560 CCAR2Q8N163 923 aaKnown RBP28.51■■■□□ 2.15
CLK2-201ENST00000355560 CLMNQ96JQ2 1002 aa28.51■■■□□ 2.15
CLK2-201ENST00000355560 TSG101Q99816 390 aa28.51■■■□□ 2.15
CLK2-201ENST00000355560 IRF6O14896 467 aa28.5■■■□□ 2.15
CLK2-201ENST00000355560 TTLL12Q14166 644 aaPredicted RBP28.5■■■□□ 2.15
CLK2-201ENST00000355560 MIER3Q7Z3K6 550 aa28.5■■■□□ 2.15
CLK2-201ENST00000355560 ANKRD13AQ8IZ07 590 aa28.5■■■□□ 2.15
CLK2-201ENST00000355560 BANK1Q8NDB2 785 aa28.5■■■□□ 2.15
CLK2-201ENST00000355560 BAG1Q99933 345 aaPredicted RBP28.5■■■□□ 2.15
CLK2-201ENST00000355560 TRMT1Q9NXH9 659 aaKnown RBP28.5■■■□□ 2.15
CLK2-201ENST00000355560 LOC285556D6RIA3 1793 aa28.5■■■□□ 2.15
CLK2-201ENST00000355560 TESPA1A2RU30 521 aaPredicted RBP28.49■■■□□ 2.15
CLK2-201ENST00000355560 GLTPD2A6NH11 291 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 RINT1Q6NUQ1 792 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 NEK9Q8TD19 979 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 CPLX3Q8WVH0 158 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 A1CFQ9NQ94 594 aaKnown RBP28.49■■■□□ 2.15
CLK2-201ENST00000355560 KCND1Q9NSA2 647 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.49■■■□□ 2.152e-7■■■□□ 17.8
CLK2-201ENST00000355560 ZBTB39O15060 712 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 GYPCP04921 128 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 TPM2P07951 284 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 MTIF2P46199 727 aaKnown RBP28.49■■■□□ 2.15
CLK2-201ENST00000355560 PPATQ06203 517 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 FOXR2Q6PJQ5 311 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 SFR1Q86XK3 245 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 SCFD1Q8WVM8 642 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 NACC1Q96RE7 527 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 CYP39A1Q9NYL5 469 aa28.49■■■□□ 2.15
CLK2-201ENST00000355560 B4DLN1 442 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 TBCAO75347 108 aaKnown RBP28.48■■■□□ 2.15
CLK2-201ENST00000355560 ZCWPW2Q504Y3 356 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 EAPPQ56P03 285 aaPredicted RBP28.48■■■□□ 2.15
CLK2-201ENST00000355560 GADL1Q6ZQY3 521 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 ERO1BQ86YB8 467 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 MB21D1Q8N884 522 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 TBC1D22BQ9NU19 505 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 RSPH10B2B2RC85 870 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 KIF20AO95235 890 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 FGFR1OPO95684 399 aaKnown RBP28.48■■■□□ 2.15
CLK2-201ENST00000355560 RSPH10BP0C881 870 aa28.48■■■□□ 2.15
CLK2-201ENST00000355560 CCND2P30279 289 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms