RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 STX18Q9P2W9 335 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 PGRMC1O00264 195 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 CDO1Q16878 200 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 PCIF1Q9H4Z3 704 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 EPB41L5Q9HCM4 733 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ENC1O14682 589 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ADD1P35611 737 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 FANCLQ9NW38 375 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 RIMS2Q9UQ26 1411 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 HOXB7P09629 217 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ESRRAP11474 423 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 HADHAP40939 763 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 CYTH2Q99418 400 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 SMYD3Q9H7B4 428 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 TNNQ9UQP3 1299 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 CD58P19256 250 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ANKRD13CQ8N6S4 541 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 MED23Q9ULK4 1368 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 NPATQ14207 1427 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 KIAA1755Q5JYT7 1200 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 PDCD6IPQ8WUM4 868 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 FAF2Q96CS3 445 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 BCL2L12Q9HB09 334 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 TRAPPC10P48553 1259 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 BBS9Q3SYG4 887 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 PPP1R16BQ96T49 567 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 FSD1LQ9BXM9 530 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ASPRV1Q53RT3 343 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 KLC2Q9H0B6 622 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 FARP1Q9Y4F1 1045 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ZBTB7BO15156 539 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 TTLL1O95922 423 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 KRT8P05787 483 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 THEM5Q8N1Q8 247 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 RASGRF2O14827 1237 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 SURF1Q15526 300 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 GINM1Q9NU53 330 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 BABAM1Q9NWV8 329 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 STRIP2Q9ULQ0 834 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ZSCAN9O15535 394 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 BCAMP50895 628 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 OSTNP61366 133 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 KCTD1Q719H9 257 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ZNF467Q7Z7K2 595 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 STX19Q8N4C7 294 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 VPS39Q96JC1 886 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 PARVGQ9HBI0 331 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 GFPT2O94808 682 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 SEC24BO95487 1268 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 TRIML2Q8N7C3 387 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 PBKQ96KB5 322 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 CLIC2O15247 247 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 DTNBO60941 627 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 PYGBP11216 843 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 PCP11498 1178 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 GYG1P46976 350 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 POLE2P56282 527 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 NFKBIL1Q9UBC1 381 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 TTC23LQ6PF05 361 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 ACAD11Q709F0 780 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 OR9Q1Q8NGQ5 310 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 OTUD7AQ8TE49 926 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 RAPGEF5Q92565 580 aa6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 LARP4BQ92615 738 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-201ENST00000355086 TNKSO95271 1327 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 DDX5P17844 614 aaKnown RBP6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 KHDRBS2Q5VWX1 349 aaKnown RBP6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 TRPC5Q9UL62 973 aaPredicted RBP6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 TRIM33Q9UPN9 1127 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 LAD1O00515 517 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 DPYSL4O14531 572 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 CMA1P23946 247 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 STAT2P52630 851 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 GPATCH4Q5T3I0 446 aaKnown RBP6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 WDR11Q9BZH6 1224 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 UHRF1BP1LA0JNW5 1464 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 USP14P54578 494 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 WASHC5Q12768 1159 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 ZNF827Q17R98 1081 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 PSMA2P25787 234 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 NDUFA8P51970 172 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 ZC3H18Q86VM9 953 aaKnown RBP6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 ZWILCHQ9H900 591 aa6.21□□□□□ -1.41
SRGAP1-201ENST00000355086 COBLO75128 1261 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 SLCO1A2P46721 670 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 NLRP4Q96MN2 994 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 AMNQ9BXJ7 453 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 TRPV6Q9H1D0 765 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 AARSP49588 968 aaKnown RBP eCLIP6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 ME3Q16798 604 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 EDEM3Q9BZQ6 932 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 TJP3O95049 919 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 NNMTP40261 264 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 MORF4L2Q15014 288 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 HIPK4Q8NE63 616 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 CLCA2Q9UQC9 943 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 SLC4A7Q9Y6M7 1214 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 CLRN2A0PK11 232 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 DNAJC10Q8IXB1 793 aa6.21□□□□□ -1.42
SRGAP1-201ENST00000355086 ZBTB38Q8NAP3 1195 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms