RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 TMCC3Q9ULS5 477 aa11.89□□□□□ -0.51
SND1-201ENST00000354725 AKR1B15C9JRZ8 316 aaPredicted RBP11.88□□□□□ -0.51
SND1-201ENST00000354725 ERLIN1O75477 346 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 IDH1O75874 414 aaKnown RBP11.88□□□□□ -0.51
SND1-201ENST00000354725 KRT38O76015 456 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 UFL1O94874 794 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 SLC8A1P32418 973 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 PPP4CP60510 307 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 PDXDC2PQ6P474 469 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 PARP9Q8IXQ6 854 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 SUGCTQ9HAC7 445 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 SLC40A1Q9NP59 571 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 CNNM1Q9NRU3 951 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 TRPC6Q9Y210 931 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 SOWAHDA6NJG2 315 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 PRPF3O43395 683 aaKnown RBP11.88□□□□□ -0.51
SND1-201ENST00000354725 TUBB4BP68371 445 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 POU5F1Q01860 360 aaKnown RBP11.88□□□□□ -0.51
SND1-201ENST00000354725 CASP8Q14790 479 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 MFSD6Q6ZSS7 791 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 SRGAP1Q7Z6B7 1085 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 WDR75Q8IWA0 830 aaKnown RBP11.88□□□□□ -0.51
SND1-201ENST00000354725 ZNF654Q8IZM8 581 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 MAGEB6Q8N7X4 407 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 CUL5Q93034 780 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 FAM205AQ6ZU69 1335 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 SYNRGQ9UMZ2 1314 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 A0A0U1RQJ8 604 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 PRPF6O94906 941 aaKnown RBP11.88□□□□□ -0.51
SND1-201ENST00000354725 SLC5A1P13866 664 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 TCF3P15923 654 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 PLCB4Q15147 1175 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 SLC4A8Q2Y0W8 1093 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 AGAP9Q5VTM2 703 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 B4GALNT4Q76KP1 1039 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 ADGRA1Q86SQ6 560 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 TRMT44Q8IYL2 757 aaKnown RBP11.88□□□□□ -0.51
SND1-201ENST00000354725 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 NAPBQ9H115 298 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 VCPKMTQ9H867 229 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 ARMT1Q9H993 441 aa11.88□□□□□ -0.51
SND1-201ENST00000354725 PRKAB2O43741 272 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 SESN3P58005 492 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 GNG11P61952 73 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 ATP2C1P98194 919 aaPredicted RBP11.87□□□□□ -0.51
SND1-201ENST00000354725 RBL2Q08999 1139 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 TEKT1Q969V4 418 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 RIOK1Q9BRS2 568 aaKnown RBP11.87□□□□□ -0.51
SND1-201ENST00000354725 ZCWPW1Q9H0M4 648 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 KAT14Q9H8E8 782 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 AS3MTQ9HBK9 375 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 ABCB6Q9NP58 842 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 AASDHPPTQ9NRN7 309 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 A0A1B0GVG6 124 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 F8VZ95 297 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 GNAT1P11488 350 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 MAP3K12Q12852 859 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 WTAPQ15007 396 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 ZFAND2BQ8WV99 257 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 KCNN1Q92952 543 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
SND1-201ENST00000354725 VIL1P09327 827 aaKnown RBP11.87□□□□□ -0.51
SND1-201ENST00000354725 VCAM1P19320 739 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 FKBP1AP62942 108 aaKnown RBP11.87□□□□□ -0.51
SND1-201ENST00000354725 TROAPQ12815 778 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 SCLT1Q96NL6 688 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 SPAG5Q96R06 1193 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 CTAGE1Q96RT6 745 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 COA1Q9GZY4 146 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 MYO1AQ9UBC5 1043 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 HDAC6Q9UBN7 1215 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 CDC23Q9UJX2 597 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 SAMM50Q9Y512 469 aa11.87□□□□□ -0.51
SND1-201ENST00000354725 FAM205CA6NFA0 338 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 GOLGA6L10A6NI86 522 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 ECE2O60344 883 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 AMPD3Q01432 767 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 MYBPC3Q14896 1274 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 DHRS1Q96LJ7 313 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 CD209Q9NNX6 404 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 NAV1Q8NEY1 1877 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 E2F6O75461 281 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 BMP15O95972 392 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 MMEP08473 750 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 PCP11498 1178 aaKnown RBP11.86□□□□□ -0.51
SND1-201ENST00000354725 ERVK-24P63145 666 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 PPARAQ07869 468 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 SEPT2Q15019 361 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 SAFBQ15424 915 aaKnown RBP eCLIP11.86□□□□□ -0.515e-7■□□□□ 9.9
SND1-201ENST00000354725 SPATS2Q86XZ4 545 aaKnown RBP11.86□□□□□ -0.51
SND1-201ENST00000354725 C4orf32Q8N8J7 132 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 ENAHQ8N8S7 591 aaPredicted RBP11.86□□□□□ -0.51
SND1-201ENST00000354725 TBC1D31Q96DN5 1066 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 DESI2Q9BSY9 194 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 ZNRF3Q9ULT6 936 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 ARIH1Q9Y4X5 557 aaPredicted RBP11.86□□□□□ -0.51
SND1-201ENST00000354725 CNTNAP5Q8WYK1 1306 aa11.86□□□□□ -0.51
SND1-201ENST00000354725 PDLIM1O00151 329 aa11.85□□□□□ -0.51
SND1-201ENST00000354725 FXR1P51114 621 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■□□□□ 10.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms