RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 PRDM12Q9H4Q4 367 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 BCAS3Q9H6U6 928 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 TANC1Q9C0D5 1861 aa13.15□□□□□ -0.31
CDRT1-202ENST00000354433 CKBP12277 381 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 ADCY7P51828 1080 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 APOBRQ0VD83 1088 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 PPP1R18Q6NYC8 613 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 NECAB1Q8N987 351 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 GIMAP8Q8ND71 665 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-202ENST00000354433 DHX38Q92620 1227 aaKnown RBP13.14□□□□□ -0.31
CDRT1-202ENST00000354433 ATP6V0A1Q93050 837 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 GPRASP2Q96D09 838 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 VWCEQ96DN2 955 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 PGBD1Q96JS3 809 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 CTAGE1Q96RT6 745 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 SLC9A7Q96T83 725 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 GPR20Q99678 358 aa13.14□□□□□ -0.31
CDRT1-202ENST00000354433 YBX2Q9Y2T7 364 aaKnown RBP13.14□□□□□ -0.31
CDRT1-202ENST00000354433 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-202ENST00000354433 CCDC196A0A1B0GTZ2 297 aa13.13□□□□□ -0.31
CDRT1-202ENST00000354433 hCG_1984214I3L0E3 225 aa13.13□□□□□ -0.31
CDRT1-202ENST00000354433 STX6O43752 255 aa13.13□□□□□ -0.31
CDRT1-202ENST00000354433 PARNO95453 639 aaKnown RBP13.13□□□□□ -0.31
CDRT1-202ENST00000354433 SMIM10L2AP0DMW4 78 aa13.13□□□□□ -0.31
CDRT1-202ENST00000354433 SMIM10L2BP0DMW5 78 aa13.13□□□□□ -0.31
CDRT1-202ENST00000354433 MYOGP15173 224 aa13.13□□□□□ -0.31
CDRT1-202ENST00000354433 SYT1P21579 422 aa13.13□□□□□ -0.31
CDRT1-202ENST00000354433 CDC27P30260 824 aa13.13□□□□□ -0.31
CDRT1-202ENST00000354433 THPOP40225 353 aa13.13□□□□□ -0.31
CDRT1-202ENST00000354433 RCAN1P53805 252 aa13.13□□□□□ -0.31
CDRT1-202ENST00000354433 ZNF713Q8N859 430 aaPredicted RBP13.13□□□□□ -0.31
CDRT1-202ENST00000354433 SENP7Q9BQF6 1050 aa13.13□□□□□ -0.31
CDRT1-202ENST00000354433 EYSQ5T1H1 3165 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 SMCO2A6NFE2 343 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 BAIAP3O94812 1187 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 ZSCAN22P10073 491 aaPredicted RBP13.12□□□□□ -0.31
CDRT1-202ENST00000354433 ITGB5P18084 799 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 IGFBP4P22692 258 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 TCF7P36402 384 aaPredicted RBP13.12□□□□□ -0.31
CDRT1-202ENST00000354433 ZNF618Q5T7W0 954 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 TYW1BQ6NUM6 668 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 PPM1EQ8WY54 764 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 WNT8BQ93098 351 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 KIF3AQ9Y496 699 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 PCDHA11Q9Y5I1 949 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 ATP6V1DQ9Y5K8 247 aa13.12□□□□□ -0.31
CDRT1-202ENST00000354433 SCN5AQ14524 2016 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 STXBP3O00186 592 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 DLL1O00548 723 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 CA3P07451 260 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 CTSHP09668 335 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 GNAT1P11488 350 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 KCNA2P16389 499 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 MARK3P27448 753 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 PDIA3P30101 505 aaKnown RBP13.11□□□□□ -0.31
CDRT1-202ENST00000354433 ADD1P35611 737 aaKnown RBP13.11□□□□□ -0.31
CDRT1-202ENST00000354433 HMGN5P82970 282 aaKnown RBP13.11□□□□□ -0.31
CDRT1-202ENST00000354433 AKAP17AQ02040 695 aaKnown RBP13.11□□□□□ -0.31
CDRT1-202ENST00000354433 RBL2Q08999 1139 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 SCRN1Q12765 414 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 HIC1Q14526 733 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 CNKSR3Q6P9H4 555 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 ANO3Q9BYT9 981 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 RNPEPQ9H4A4 650 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 RIC8AQ9NPQ8 531 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 SETD4Q9NVD3 440 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 TELO2Q9Y4R8 837 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 UNC80Q8N2C7 3258 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 RSPH10B2B2RC85 870 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 TREHO43280 583 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 TRAK2O60296 914 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 NBNO60934 754 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 ATP9AO75110 1047 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 FOSP01100 380 aaPredicted RBP13.11□□□□□ -0.31
CDRT1-202ENST00000354433 RSPH10BP0C881 870 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 ZNF76P36508 570 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 ARHGAP4P98171 946 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 FUT2Q10981 343 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 SERINC5Q86VE9 423 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 PHOSPHO2Q8TCD6 241 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 GLG1Q92896 1179 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 ZBED2Q9BTP6 218 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 GLT8D2Q9H1C3 349 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 JPH1Q9HDC5 661 aaPredicted RBP13.11□□□□□ -0.31
CDRT1-202ENST00000354433 JADE2Q9NQC1 790 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 UBIAD1Q9Y5Z9 338 aa13.11□□□□□ -0.31
CDRT1-202ENST00000354433 EMSYQ7Z589 1322 aa13.1□□□□□ -0.31
CDRT1-202ENST00000354433 MYH7BA7E2Y1 1941 aa13.1□□□□□ -0.31
CDRT1-202ENST00000354433 MAFGO15525 162 aa13.1□□□□□ -0.31
CDRT1-202ENST00000354433 TLL1O43897 1013 aa13.1□□□□□ -0.31
CDRT1-202ENST00000354433 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
CDRT1-202ENST00000354433 SCG2P13521 617 aa13.1□□□□□ -0.31
CDRT1-202ENST00000354433 WDR5P61964 334 aaKnown RBP13.1□□□□□ -0.31
CDRT1-202ENST00000354433 STK3Q13188 491 aa13.1□□□□□ -0.31
CDRT1-202ENST00000354433 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms