RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 RAD21O60216 631 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 FAM83BQ5T0W9 1011 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 KRT79Q5XKE5 535 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 EP400NLQ6ZTU2 488 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 PIK3R5Q8WYR1 880 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 ZMYND12Q9H0C1 365 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 SH3BGRP55822 239 aaPredicted RBP13.41□□□□□ -0.26
TRERF1-202ENST00000354325 TRAF1Q13077 416 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 EARS2Q5JPH6 523 aaKnown RBP13.41□□□□□ -0.26
TRERF1-202ENST00000354325 THOC1Q96FV9 657 aaKnown RBP13.41□□□□□ -0.26
TRERF1-202ENST00000354325 CCDC113Q9H0I3 377 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 GREM2Q9H772 168 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 EHD2Q9NZN4 543 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 ABCF2Q9UG63 623 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 PARP4Q9UKK3 1724 aaKnown RBP13.41□□□□□ -0.26
TRERF1-202ENST00000354325 SIPA1L3O60292 1781 aaPredicted RBP13.41□□□□□ -0.26
TRERF1-202ENST00000354325 TLDC2A0PJX2 215 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 ABLIM1O14639 778 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 PRKAB2O43741 272 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 NQO1P15559 274 aaKnown RBP13.41□□□□□ -0.26
TRERF1-202ENST00000354325 POLR2FP61218 127 aaKnown RBP13.41□□□□□ -0.26
TRERF1-202ENST00000354325 TROAPQ12815 778 aa13.41□□□□□ -0.26
TRERF1-202ENST00000354325 MKRN3Q13064 507 aaKnown RBP13.41□□□□□ -0.26
TRERF1-202ENST00000354325 MYO5AQ9Y4I1 1855 aaKnown RBP13.4□□□□□ -0.26
TRERF1-202ENST00000354325 H2AFZP0C0S5 128 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 RASSF2P50749 326 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 H2AFVQ71UI9 128 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 DAAM2Q86T65 1068 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 COL23A1Q86Y22 540 aaPredicted RBP13.4□□□□□ -0.26
TRERF1-202ENST00000354325 DAGLBQ8NCG7 672 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 DDX12PQ92771 950 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 PGM2Q96G03 612 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 ZNF287Q9HBT7 754 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 O00370 1275 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 ATP2A2P16615 1042 aaKnown RBP13.4□□□□□ -0.26
TRERF1-202ENST00000354325 PEX19P40855 299 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 FUT2Q10981 343 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 BTNL9Q6UXG8 535 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.4□□□□□ -0.26
TRERF1-202ENST00000354325 SLC39A2Q9NP94 309 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 TXLNGQ9NUQ3 528 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 KLHL14Q9P2G3 628 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 SEC63Q9UGP8 760 aaKnown RBP13.4□□□□□ -0.26
TRERF1-202ENST00000354325 ADAMTS7Q9UKP4 1686 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 DAAM1Q9Y4D1 1078 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 CYP27B1O15528 508 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 PCK1P35558 622 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 ERVK-9P63128 1117 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 GRIK3Q13003 919 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 RASGRF1Q13972 1273 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 TAF11Q15544 211 aa13.4□□□□□ -0.26
TRERF1-202ENST00000354325 MYH7P12883 1935 aa13.4□□□□□ -0.27
TRERF1-202ENST00000354325 E7ENQ6 273 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 SNUPNO95149 360 aaKnown RBP13.39□□□□□ -0.27
TRERF1-202ENST00000354325 CCDC65Q8IXS2 484 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 ELAC2Q9BQ52 826 aaKnown RBP13.39□□□□□ -0.27
TRERF1-202ENST00000354325 INTUQ9ULD6 942 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 ATP8A1Q9Y2Q0 1164 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 NOC2LQ9Y3T9 749 aaKnown RBP13.39□□□□□ -0.27
TRERF1-202ENST00000354325 LRP6O75581 1613 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 CETN3O15182 167 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 MRPS35P82673 323 aaKnown RBP13.39□□□□□ -0.27
TRERF1-202ENST00000354325 STK4Q13043 487 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 DHX34Q14147 1143 aaKnown RBP13.39□□□□□ -0.27
TRERF1-202ENST00000354325 ZNF268Q14587 947 aaPredicted RBP13.39□□□□□ -0.27
TRERF1-202ENST00000354325 FAM133BQ5BKY9 247 aaKnown RBP13.39□□□□□ -0.27
TRERF1-202ENST00000354325 SLC30A9Q6PML9 568 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 HEATR3Q7Z4Q2 680 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 EGFL6Q8IUX8 553 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 SCFD2Q8WU76 684 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 TSC22D3Q99576 134 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 SUCLA2Q9P2R7 463 aaPredicted RBP13.39□□□□□ -0.27
TRERF1-202ENST00000354325 AXIN2Q9Y2T1 843 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 RIC1Q4ADV7 1423 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 ATP8B3O60423 1300 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 RASSF10A6NK89 507 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 F8VZ95 297 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 MYBP10242 640 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 FERP16591 822 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 CAVIN4Q5BKX8 364 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
TRERF1-202ENST00000354325 TMC3Q7Z5M5 1100 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 GRAMD1AQ96CP6 724 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 STAMBPL1Q96FJ0 436 aa13.39□□□□□ -0.27
TRERF1-202ENST00000354325 USP15Q9Y4E8 981 aaPredicted RBP13.39□□□□□ -0.27
TRERF1-202ENST00000354325 AHCYL1O43865 530 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 RTN2O75298 545 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 GFPT2O94808 682 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 CHN1P15882 459 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 KLRC1P26715 233 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 ALDH3A1P30838 453 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 INF2Q27J81 1249 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 C11orf91Q3C1V1 193 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 BSDC1Q9NW68 430 aaPredicted RBP13.38□□□□□ -0.27
TRERF1-202ENST00000354325 C5P01031 1676 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 ARID5AQ03989 594 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 BAP1Q92560 729 aa13.38□□□□□ -0.27
TRERF1-202ENST00000354325 LARP4BQ92615 738 aaKnown RBP13.38□□□□□ -0.27
TRERF1-202ENST00000354325 ECT2Q9H8V3 914 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms