RNA–Protein interactions for RNA: ENST00000353024.4

TUFT1-201, Transcript of tuftelin 1, humanhuman

TSL 2 BASIC

Gene TUFT1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-201ENST00000353024 LRCH2Q5VUJ6 765 aa17.08■□□□□ 0.33
TUFT1-201ENST00000353024 CCDC125Q86Z20 511 aa17.08■□□□□ 0.33
TUFT1-201ENST00000353024 NELFCDQ8IXH7 590 aa17.08■□□□□ 0.33
TUFT1-201ENST00000353024 PDCL2Q8N4E4 241 aa17.08■□□□□ 0.33
TUFT1-201ENST00000353024 EHMT1Q9H9B1 1298 aa17.08■□□□□ 0.33
TUFT1-201ENST00000353024 COL20A1Q9P218 1284 aa17.08■□□□□ 0.33
TUFT1-201ENST00000353024 HACL1Q9UJ83 578 aa17.08■□□□□ 0.33
TUFT1-201ENST00000353024 CCPG1Q9ULG6 757 aa17.08■□□□□ 0.33
TUFT1-201ENST00000353024 CD2APQ9Y5K6 639 aa17.08■□□□□ 0.33
TUFT1-201ENST00000353024 MRFAP1Q9Y605 127 aa17.08■□□□□ 0.33
TUFT1-201ENST00000353024 TRAF5O00463 557 aa17.08■□□□□ 0.32
TUFT1-201ENST00000353024 KRT18P05783 430 aaKnown RBP17.08■□□□□ 0.32
TUFT1-201ENST00000353024 ARP10275 920 aa17.08■□□□□ 0.32
TUFT1-201ENST00000353024 HNRNPH3P31942 346 aaKnown RBP17.08■□□□□ 0.32
TUFT1-201ENST00000353024 HOXD13P35453 343 aa17.08■□□□□ 0.32
TUFT1-201ENST00000353024 ELF2Q15723 593 aa17.08■□□□□ 0.32
TUFT1-201ENST00000353024 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
TUFT1-201ENST00000353024 FBXO41Q8TF61 875 aa17.08■□□□□ 0.32
TUFT1-201ENST00000353024 RUSC1Q9BVN2 902 aa17.08■□□□□ 0.32
TUFT1-201ENST00000353024 BHMT2Q9H2M3 363 aa17.08■□□□□ 0.32
TUFT1-201ENST00000353024 CNOT7Q9UIV1 285 aaKnown RBP17.08■□□□□ 0.32
TUFT1-201ENST00000353024 BCS1LQ9Y276 419 aa17.08■□□□□ 0.32
TUFT1-201ENST00000353024 NFIBO00712 420 aa17.07■□□□□ 0.32
TUFT1-201ENST00000353024 CDK17Q00537 523 aa17.07■□□□□ 0.32
TUFT1-201ENST00000353024 CTTNQ14247 550 aaKnown RBP17.07■□□□□ 0.32
TUFT1-201ENST00000353024 TBC1D10BQ4KMP7 808 aaPredicted RBP17.07■□□□□ 0.32
TUFT1-201ENST00000353024 SFR1Q86XK3 245 aa17.07■□□□□ 0.32
TUFT1-201ENST00000353024 RSPH10B2B2RC85 870 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 KIF5CO60282 957 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 KIF20AO95235 890 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 RSPH10BP0C881 870 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 HERVK_113P62684 666 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 KCNMA1Q12791 1236 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 EDRF1Q3B7T1 1238 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 RINT1Q6NUQ1 792 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 TRIM59Q8IWR1 403 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 HOOK2Q96ED9 719 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 DYDC2Q96IM9 177 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 ZFP91Q96JP5 570 aaPredicted RBP17.06■□□□□ 0.32
TUFT1-201ENST00000353024 MXRA8Q9BRK3 442 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 BCAS3Q9H6U6 928 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 SLC38A10Q9HBR0 1119 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 CGNQ9P2M7 1197 aaKnown RBP17.06■□□□□ 0.32
TUFT1-201ENST00000353024 PPP1R1BQ9UD71 204 aaPredicted RBP17.06■□□□□ 0.32
TUFT1-201ENST00000353024 RABGAP1Q9Y3P9 1069 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 TADA3O75528 432 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 ITGB5P18084 799 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 SETQ01105 290 aaPredicted RBP17.06■□□□□ 0.32
TUFT1-201ENST00000353024 BMT2Q1RMZ1 405 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 ERCC6LQ2NKX8 1250 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 TSR1Q2NL82 804 aaKnown RBP17.06■□□□□ 0.32
TUFT1-201ENST00000353024 NBPF12Q5TAG4 269 aaPredicted RBP17.06■□□□□ 0.32
TUFT1-201ENST00000353024 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 ZNF662Q6ZS27 426 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 PCMTD1Q96MG8 357 aaPredicted RBP17.06■□□□□ 0.32
TUFT1-201ENST00000353024 CARD6Q9BX69 1037 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 UNC45AQ9H3U1 944 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 TRAF3IP3Q9Y228 551 aa17.06■□□□□ 0.32
TUFT1-201ENST00000353024 GAS7O60861 476 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 GNA14O95837 355 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 MUTP22033 750 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 ARHGAP29Q52LW3 1261 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 ZNF577Q9BSK1 485 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 CCDC94Q9BW85 323 aaPredicted RBP17.05■□□□□ 0.32
TUFT1-201ENST00000353024 ZHX3Q9H4I2 956 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 WRAP73Q9P2S5 460 aaPredicted RBP17.05■□□□□ 0.32
TUFT1-201ENST00000353024 ZNF112Q9UJU3 913 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 PLAGL2Q9UPG8 496 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 BCRP11274 1271 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 ERCC3P19447 782 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 ZNF569Q5MCW4 686 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 C1orf186Q6ZWK4 172 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 CCDC170Q8IYT3 715 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 CCDC155Q8N6L0 562 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 IL31RAQ8NI17 732 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 PIGOQ8TEQ8 1089 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 BAP1Q92560 729 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 WDR11Q9BZH6 1224 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 NHEJ1Q9H9Q4 299 aaPredicted RBP17.05■□□□□ 0.32
TUFT1-201ENST00000353024 MYO1AQ9UBC5 1043 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 PPP1R9AQ9ULJ8 1098 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 GJA3Q9Y6H8 435 aa17.05■□□□□ 0.32
TUFT1-201ENST00000353024 EIF3CLB5ME19 914 aaKnown RBP17.04■□□□□ 0.32
TUFT1-201ENST00000353024 ZBTB39O15060 712 aa17.04■□□□□ 0.32
TUFT1-201ENST00000353024 CHMP2AO43633 222 aa17.04■□□□□ 0.32
TUFT1-201ENST00000353024 MYBP10242 640 aa17.04■□□□□ 0.32
TUFT1-201ENST00000353024 VCAM1P19320 739 aa17.04■□□□□ 0.32
TUFT1-201ENST00000353024 EPHA7Q15375 998 aa17.04■□□□□ 0.32
TUFT1-201ENST00000353024 KNOP1Q1ED39 458 aaKnown RBP17.04■□□□□ 0.32
TUFT1-201ENST00000353024 MUM1L1Q5H9M0 696 aa17.04■□□□□ 0.32
TUFT1-201ENST00000353024 TPH2Q8IWU9 490 aa17.04■□□□□ 0.32
TUFT1-201ENST00000353024 SLC35F6Q8N357 371 aa17.04■□□□□ 0.32
TUFT1-201ENST00000353024 ZNF397Q8NF99 534 aaPredicted RBP17.04■□□□□ 0.32
TUFT1-201ENST00000353024 RIT2Q99578 217 aa17.04■□□□□ 0.32
TUFT1-201ENST00000353024 EIF3CQ99613 913 aaKnown RBP17.04■□□□□ 0.32
TUFT1-201ENST00000353024 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
TUFT1-201ENST00000353024 FRMPD4Q14CM0 1322 aa17.04■□□□□ 0.32
TUFT1-201ENST00000353024 ZNF541Q9H0D2 1346 aa17.04■□□□□ 0.32
TUFT1-201ENST00000353024 IPO5O00410 1097 aaKnown RBP17.03■□□□□ 0.32
TUFT1-201ENST00000353024 ADAM9Q13443 819 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms