RNA–Protein interactions for RNA: ENST00000350771.7

H2AFV-204, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-204ENST00000350771 KIAA0753Q2KHM9 967 aa29.38■■■□□ 2.29
H2AFV-204ENST00000350771 PIK3AP1Q6ZUJ8 805 aa29.38■■■□□ 2.29
H2AFV-204ENST00000350771 ZNF577Q9BSK1 485 aa29.38■■■□□ 2.29
H2AFV-204ENST00000350771 TUT1Q9H6E5 874 aaKnown RBP29.38■■■□□ 2.29
H2AFV-204ENST00000350771 TBC1D22BQ9NU19 505 aa29.38■■■□□ 2.29
H2AFV-204ENST00000350771 TMEM39AQ9NV64 488 aa29.38■■■□□ 2.29
H2AFV-204ENST00000350771 MSH4O15457 936 aa29.37■■■□□ 2.29
H2AFV-204ENST00000350771 ATG7O95352 703 aa29.37■■■□□ 2.29
H2AFV-204ENST00000350771 TDP2O95551 362 aa29.37■■■□□ 2.29
H2AFV-204ENST00000350771 HOXC8P31273 242 aa29.37■■■□□ 2.29
H2AFV-204ENST00000350771 TCF7P36402 384 aaPredicted RBP29.37■■■□□ 2.29
H2AFV-204ENST00000350771 SP4Q02446 784 aa29.37■■■□□ 2.29
H2AFV-204ENST00000350771 PPP4R3AQ6IN85 833 aa29.37■■■□□ 2.29
H2AFV-204ENST00000350771 NEK8Q86SG6 692 aa29.37■■■□□ 2.29
H2AFV-204ENST00000350771 FAM184AQ8NB25 1140 aa29.37■■■□□ 2.29
H2AFV-204ENST00000350771 TRPV6Q9H1D0 765 aa29.37■■■□□ 2.29
H2AFV-204ENST00000350771 PRDM5Q9NQX1 630 aaPredicted RBP29.37■■■□□ 2.29
H2AFV-204ENST00000350771 EMSYQ7Z589 1322 aa29.37■■■□□ 2.29
H2AFV-204ENST00000350771 LGR5O75473 907 aa29.36■■■□□ 2.29
H2AFV-204ENST00000350771 CCNE2O96020 404 aa29.36■■■□□ 2.29
H2AFV-204ENST00000350771 SUPT20HL2P0C7V6 817 aa29.36■■■□□ 2.29
H2AFV-204ENST00000350771 GCFC2P16383 781 aaKnown RBP29.36■■■□□ 2.29
H2AFV-204ENST00000350771 ITGB8P26012 769 aa29.36■■■□□ 2.29
H2AFV-204ENST00000350771 ACTR2P61160 394 aa29.36■■■□□ 2.29
H2AFV-204ENST00000350771 CUL4AQ13619 759 aa29.36■■■□□ 2.29
H2AFV-204ENST00000350771 SLC5A5Q92911 643 aa29.36■■■□□ 2.29
H2AFV-204ENST00000350771 TRMT13Q9NUP7 481 aaKnown RBP29.36■■■□□ 2.29
H2AFV-204ENST00000350771 GTF2IRD1Q9UHL9 959 aa29.36■■■□□ 2.29
H2AFV-204ENST00000350771 TRIM50Q86XT4 487 aa29.35■■■□□ 2.29
H2AFV-204ENST00000350771 CTAGE1Q96RT6 745 aa29.35■■■□□ 2.29
H2AFV-204ENST00000350771 RIT2Q99578 217 aa29.35■■■□□ 2.29
H2AFV-204ENST00000350771 NAP1L4Q99733 375 aaKnown RBP29.35■■■□□ 2.29
H2AFV-204ENST00000350771 ZNF215Q9UL58 517 aaPredicted RBP29.35■■■□□ 2.29
H2AFV-204ENST00000350771 IGKV6D-21A0A0A0MT36 114 aa29.34■■■□□ 2.29
H2AFV-204ENST00000350771 FAM205CA6NFA0 338 aa29.34■■■□□ 2.29
H2AFV-204ENST00000350771 FOSBP53539 338 aa29.34■■■□□ 2.29
H2AFV-204ENST00000350771 FAM47CQ5HY64 1035 aa29.34■■■□□ 2.29
H2AFV-204ENST00000350771 C7orf31Q8N865 590 aa29.34■■■□□ 2.29
H2AFV-204ENST00000350771 ETNPPLQ8TBG4 499 aa29.34■■■□□ 2.29
H2AFV-204ENST00000350771 PCYT2Q99447 389 aa29.34■■■□□ 2.29
H2AFV-204ENST00000350771 HDAC6Q9UBN7 1215 aa29.34■■■□□ 2.29
H2AFV-204ENST00000350771 KIF3AQ9Y496 699 aa29.34■■■□□ 2.29
H2AFV-204ENST00000350771 TIMP1P01033 207 aa29.33■■■□□ 2.29
H2AFV-204ENST00000350771 GUCY1B3Q02153 619 aa29.33■■■□□ 2.29
H2AFV-204ENST00000350771 SAFBQ15424 915 aaKnown RBP eCLIP29.33■■■□□ 2.29
H2AFV-204ENST00000350771 LETM2Q2VYF4 491 aa29.33■■■□□ 2.29
H2AFV-204ENST00000350771 GDF6Q6KF10 455 aaPredicted RBP29.33■■■□□ 2.29
H2AFV-204ENST00000350771 ZNF746Q6NUN9 644 aaPredicted RBP29.33■■■□□ 2.29
H2AFV-204ENST00000350771 ABHD15Q6UXT9 468 aa29.33■■■□□ 2.29
H2AFV-204ENST00000350771 PPP1R13LQ8WUF5 828 aa29.33■■■□□ 2.29
H2AFV-204ENST00000350771 FOXP1Q9H334 677 aaPredicted RBP29.33■■■□□ 2.29
H2AFV-204ENST00000350771 DDX25Q9UHL0 483 aaKnown RBP29.33■■■□□ 2.29
H2AFV-204ENST00000350771 TRIP12Q14669 1992 aaPredicted RBP29.33■■■□□ 2.29
H2AFV-204ENST00000350771 WDR81Q562E7 1941 aa29.32■■■□□ 2.28
H2AFV-204ENST00000350771 SLC37A4O43826 429 aa29.32■■■□□ 2.28
H2AFV-204ENST00000350771 KRT76Q01546 638 aa29.32■■■□□ 2.28
H2AFV-204ENST00000350771 UTP14CQ5TAP6 766 aaKnown RBP29.32■■■□□ 2.28
H2AFV-204ENST00000350771 NOC4LQ9BVI4 516 aaKnown RBP29.32■■■□□ 2.28
H2AFV-204ENST00000350771 SMARCAD1Q9H4L7 1026 aa29.32■■■□□ 2.28
H2AFV-204ENST00000350771 KCNMB3Q9NPA1 279 aa29.32■■■□□ 2.28
H2AFV-204ENST00000350771 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.32■■■□□ 2.28
H2AFV-204ENST00000350771 RAG1P15918 1043 aa29.31■■■□□ 2.28
H2AFV-204ENST00000350771 B3GNT9Q6UX72 402 aa29.31■■■□□ 2.28
H2AFV-204ENST00000350771 SMAP1Q8IYB5 467 aaPredicted RBP29.31■■■□□ 2.28
H2AFV-204ENST00000350771 DEFB123Q8N688 67 aa29.31■■■□□ 2.28
H2AFV-204ENST00000350771 ERAP1Q9NZ08 941 aa29.31■■■□□ 2.28
H2AFV-204ENST00000350771 PSMD10O75832 226 aa29.3■■■□□ 2.28
H2AFV-204ENST00000350771 CHMP4BP1P59074 171 aa29.3■■■□□ 2.28
H2AFV-204ENST00000350771 HIC1Q14526 733 aa29.3■■■□□ 2.28
H2AFV-204ENST00000350771 PTGISQ16647 500 aa29.3■■■□□ 2.28
H2AFV-204ENST00000350771 PLPPR4Q7Z2D5 763 aa29.3■■■□□ 2.28
H2AFV-204ENST00000350771 AFAP1L1Q8TED9 768 aa29.3■■■□□ 2.28
H2AFV-204ENST00000350771 BADQ92934 168 aa29.3■■■□□ 2.28
H2AFV-204ENST00000350771 SNX21Q969T3 373 aa29.3■■■□□ 2.28
H2AFV-204ENST00000350771 KAT6AQ92794 2004 aa29.3■■■□□ 2.28
H2AFV-204ENST00000350771 DDX39AO00148 427 aaKnown RBP29.29■■■□□ 2.28
H2AFV-204ENST00000350771 TBX3O15119 743 aa29.29■■■□□ 2.28
H2AFV-204ENST00000350771 SMIM10L2AP0DMW4 78 aa29.29■■■□□ 2.28
H2AFV-204ENST00000350771 SMIM10L2BP0DMW5 78 aa29.29■■■□□ 2.28
H2AFV-204ENST00000350771 GJB2P29033 226 aa29.29■■■□□ 2.28
H2AFV-204ENST00000350771 MFSD5Q6N075 450 aa29.29■■■□□ 2.28
H2AFV-204ENST00000350771 UIMC1Q96RL1 719 aa29.29■■■□□ 2.28
H2AFV-204ENST00000350771 HIPK3Q9H422 1215 aa29.29■■■□□ 2.28
H2AFV-204ENST00000350771 RNPEPQ9H4A4 650 aa29.29■■■□□ 2.28
H2AFV-204ENST00000350771 CCNT1O60563 726 aaKnown RBP29.28■■■□□ 2.28
H2AFV-204ENST00000350771 GAS7O60861 476 aa29.28■■■□□ 2.28
H2AFV-204ENST00000350771 U2AF2P26368 475 aaKnown RBP eCLIP29.28■■■□□ 2.282e-8■■■■□ 19.6
H2AFV-204ENST00000350771 SLC26A2P50443 739 aa29.28■■■□□ 2.28
H2AFV-204ENST00000350771 RBL2Q08999 1139 aa29.28■■■□□ 2.28
H2AFV-204ENST00000350771 LRCH2Q5VUJ6 765 aa29.28■■■□□ 2.28
H2AFV-204ENST00000350771 GLG1Q92896 1179 aa29.28■■■□□ 2.28
H2AFV-204ENST00000350771 FAM20AQ96MK3 541 aa29.28■■■□□ 2.28
H2AFV-204ENST00000350771 AZI2Q9H6S1 392 aa29.28■■■□□ 2.28
H2AFV-204ENST00000350771 SMC3Q9UQE7 1217 aa29.28■■■□□ 2.28
H2AFV-204ENST00000350771 MYH9P35579 1960 aaKnown RBP29.28■■■□□ 2.28
H2AFV-204ENST00000350771 PITPNM1O00562 1244 aa29.27■■■□□ 2.28
H2AFV-204ENST00000350771 CYP2C9P11712 490 aa29.27■■■□□ 2.28
H2AFV-204ENST00000350771 STAT5BP51692 787 aa29.27■■■□□ 2.28
H2AFV-204ENST00000350771 ADAM17P78536 824 aa29.27■■■□□ 2.28
H2AFV-204ENST00000350771 MIS18BP1Q6P0N0 1132 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms