RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 KIF11P52732 1056 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 ARHGAP4P98171 946 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 ARID5AQ03989 594 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 PPP1R18Q6NYC8 613 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 NFRKBQ6P4R8 1299 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 SRLQ86TD4 932 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 CLRN2A0PK11 232 aa18.33■□□□□ 0.53
PDAP1-201ENST00000350498 SFI1A8K8P3 1242 aa18.33■□□□□ 0.53
PDAP1-201ENST00000350498 AGPSO00116 658 aa18.33■□□□□ 0.53
PDAP1-201ENST00000350498 NOL4O94818 638 aa18.33■□□□□ 0.53
PDAP1-201ENST00000350498 PRPF6O94906 941 aaKnown RBP18.33■□□□□ 0.53
PDAP1-201ENST00000350498 SPIRE1Q08AE8 756 aa18.33■□□□□ 0.53
PDAP1-201ENST00000350498 LENG9Q96B70 501 aa18.33■□□□□ 0.53
PDAP1-201ENST00000350498 SELENOOQ9BVL4 669 aa18.33■□□□□ 0.53
PDAP1-201ENST00000350498 EHD4Q9H223 541 aa18.33■□□□□ 0.53
PDAP1-201ENST00000350498 RSPH14Q9UHP6 348 aa18.33■□□□□ 0.53
PDAP1-201ENST00000350498 PCDHA13Q9Y5I0 950 aa18.33■□□□□ 0.53
PDAP1-201ENST00000350498 YDJCA8MPS7 323 aa18.33■□□□□ 0.52
PDAP1-201ENST00000350498 DNA2P51530 1060 aa18.33■□□□□ 0.52
PDAP1-201ENST00000350498 ABCB5Q2M3G0 1257 aa18.33■□□□□ 0.52
PDAP1-201ENST00000350498 CCDC84Q86UT8 332 aaPredicted RBP18.33■□□□□ 0.52
PDAP1-201ENST00000350498 SECISBP2LQ93073 1101 aaKnown RBP18.33■□□□□ 0.52
PDAP1-201ENST00000350498 MKL1Q969V6 931 aa18.33■□□□□ 0.52
PDAP1-201ENST00000350498 CCDC17Q96LX7 622 aa18.33■□□□□ 0.52
PDAP1-201ENST00000350498 LRRC1Q9BTT6 524 aa18.33■□□□□ 0.52
PDAP1-201ENST00000350498 TMX4Q9H1E5 349 aaPredicted RBP18.33■□□□□ 0.52
PDAP1-201ENST00000350498 TCP10L2B9ZVM9 353 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 BUB1O43683 1085 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 TLR2O60603 784 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 IPO7O95373 1038 aaKnown RBP18.32■□□□□ 0.52
PDAP1-201ENST00000350498 KCNA1Q09470 495 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 KIF5AQ12840 1032 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 CCDC40Q4G0X9 1142 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 TATDN1Q6P1N9 297 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 CREG2Q8IUH2 290 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 RETREG2Q8NC44 543 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 ACER1Q8TDN7 264 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 IFIH1Q9BYX4 1025 aaKnown RBP18.32■□□□□ 0.52
PDAP1-201ENST00000350498 PDGFDQ9GZP0 370 aaPredicted RBP18.32■□□□□ 0.52
PDAP1-201ENST00000350498 RGL1Q9NZL6 768 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 SPATA31C1P0DKV0 1188 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 VAV2P52735 878 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 LRRC63Q05C16 580 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 ZYXQ15942 572 aaKnown RBP18.32■□□□□ 0.52
PDAP1-201ENST00000350498 STRIP1Q5VSL9 837 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 ETNPPLQ8TBG4 499 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 NYAP2Q9P242 653 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 MYO3BQ8WXR4 1341 aa18.32■□□□□ 0.52
PDAP1-201ENST00000350498 A0A1W2PQJ5 194 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 KRT18P05783 430 aaKnown RBP18.31■□□□□ 0.52
PDAP1-201ENST00000350498 ACTN1P12814 892 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 SLC12A3P55017 1021 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 CCNI2Q6ZMN8 369 aaPredicted RBP18.31■□□□□ 0.52
PDAP1-201ENST00000350498 CRYGNQ8WXF5 182 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 PURBQ96QR8 312 aaKnown RBP18.31■□□□□ 0.52
PDAP1-201ENST00000350498 COL4A3BPQ9Y5P4 624 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 EML1O00423 815 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 AKR1B10O60218 316 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 HOXD13P35453 343 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 RASSF7Q02833 373 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 SEMA3FQ13275 785 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 FIGNQ5HY92 759 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 HGSNATQ68CP4 663 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 TTC19Q6DKK2 380 aaPredicted RBP18.31■□□□□ 0.52
PDAP1-201ENST00000350498 CCDC170Q8IYT3 715 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 IDI2Q9BXS1 227 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 KCTD10Q9H3F6 313 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 DEF6Q9H4E7 631 aa18.31■□□□□ 0.52
PDAP1-201ENST00000350498 POLR2FP61218 127 aaKnown RBP18.3■□□□□ 0.52
PDAP1-201ENST00000350498 TUBB4BP68371 445 aa18.3■□□□□ 0.52
PDAP1-201ENST00000350498 LSM14BQ9BX40 385 aaKnown RBP18.3■□□□□ 0.52
PDAP1-201ENST00000350498 EMILIN3Q9NT22 766 aa18.3■□□□□ 0.52
PDAP1-201ENST00000350498 MYBP10242 640 aa18.3■□□□□ 0.52
PDAP1-201ENST00000350498 FKBP3Q00688 224 aaKnown RBP18.3■□□□□ 0.52
PDAP1-201ENST00000350498 SPA17Q15506 151 aa18.3■□□□□ 0.52
PDAP1-201ENST00000350498 HYIQ5T013 277 aa18.3■□□□□ 0.52
PDAP1-201ENST00000350498 CACNA2D4Q7Z3S7 1137 aa18.3■□□□□ 0.52
PDAP1-201ENST00000350498 FBXO11Q86XK2 927 aa18.3■□□□□ 0.52
PDAP1-201ENST00000350498 PIGOQ8TEQ8 1089 aa18.3■□□□□ 0.52
PDAP1-201ENST00000350498 MS4A14Q96JA4 679 aa18.3■□□□□ 0.52
PDAP1-201ENST00000350498 CSRNP1Q96S65 589 aa18.3■□□□□ 0.52
PDAP1-201ENST00000350498 DHX36Q9H2U1 1008 aaKnown RBP18.3■□□□□ 0.52
PDAP1-201ENST00000350498 SNX12Q9UMY4 172 aa18.3■□□□□ 0.52
PDAP1-201ENST00000350498 MSH4O15457 936 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 PDXDC1Q6P996 788 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 KSR1Q8IVT5 923 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 MSL3Q8N5Y2 521 aaKnown RBP18.29■□□□□ 0.52
PDAP1-201ENST00000350498 AFAP1L1Q8TED9 768 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 DCAF4Q8WV16 495 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 TSG101Q99816 390 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 REEP2Q9BRK0 252 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 AMNQ9BXJ7 453 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 MED4Q9NPJ6 270 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 CWC15Q9P013 229 aaKnown RBP18.29■□□□□ 0.52
PDAP1-201ENST00000350498 H0YIN7 160 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 CHMP2AO43633 222 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 C21orf2O43822 256 aa18.29■□□□□ 0.52
PDAP1-201ENST00000350498 GCFC2P16383 781 aaKnown RBP18.29■□□□□ 0.52
PDAP1-201ENST00000350498 HNRNPH3P31942 346 aaKnown RBP18.29■□□□□ 0.52
PDAP1-201ENST00000350498 PPP1R2P41236 205 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8522.9 ms