RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 HIPK3Q9H422 1215 aa25.11■■□□□ 1.61
SNX3-202ENST00000349379 EMSYQ7Z589 1322 aa25.11■■□□□ 1.61
SNX3-202ENST00000349379 IPO5O00410 1097 aaKnown RBP25.1■■□□□ 1.61
SNX3-202ENST00000349379 LGR5O75473 907 aa25.1■■□□□ 1.61
SNX3-202ENST00000349379 ATG7O95352 703 aa25.1■■□□□ 1.61
SNX3-202ENST00000349379 CYP2C9P11712 490 aa25.1■■□□□ 1.61
SNX3-202ENST00000349379 CHMP4BP1P59074 171 aa25.1■■□□□ 1.61
SNX3-202ENST00000349379 NONOQ15233 471 aaKnown RBP eCLIP25.1■■□□□ 1.61
SNX3-202ENST00000349379 PRR16Q569H4 304 aa25.1■■□□□ 1.61
SNX3-202ENST00000349379 C7orf31Q8N865 590 aa25.1■■□□□ 1.61
SNX3-202ENST00000349379 TNFRSF25Q93038 417 aa25.1■■□□□ 1.61
SNX3-202ENST00000349379 PPP1R12CQ9BZL4 782 aa25.1■■□□□ 1.61
SNX3-202ENST00000349379 UMODL1Q5DID0 1318 aa25.1■■□□□ 1.61
SNX3-202ENST00000349379 MMP1P03956 469 aa25.09■■□□□ 1.61
SNX3-202ENST00000349379 HMGN5P82970 282 aaKnown RBP25.09■■□□□ 1.61
SNX3-202ENST00000349379 HIC1Q14526 733 aa25.09■■□□□ 1.61
SNX3-202ENST00000349379 PTGISQ16647 500 aa25.09■■□□□ 1.61
SNX3-202ENST00000349379 UTP14CQ5TAP6 766 aaKnown RBP25.09■■□□□ 1.61
SNX3-202ENST00000349379 TDHQ8IZJ6 230 aa25.09■■□□□ 1.61
SNX3-202ENST00000349379 PCYT2Q99447 389 aa25.09■■□□□ 1.61
SNX3-202ENST00000349379 ZNF215Q9UL58 517 aaPredicted RBP25.09■■□□□ 1.61
SNX3-202ENST00000349379 CCNE2O96020 404 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 CYP2C18P33260 490 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 KRT2P35908 639 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 MCM2P49736 904 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 ACTR2P61160 394 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 FPGSQ05932 587 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 INF2Q27J81 1249 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 Q4G0T1 1027 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 KRT40Q6A162 431 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 ZNF577Q9BSK1 485 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 WNT8AQ9H1J5 351 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 TBC1D22BQ9NU19 505 aa25.08■■□□□ 1.61
SNX3-202ENST00000349379 IGKV6D-21A0A0A0MT36 114 aa25.07■■□□□ 1.6
SNX3-202ENST00000349379 CCDC194A0A1B0GVG4 234 aa25.07■■□□□ 1.6
SNX3-202ENST00000349379 TDP2O95551 362 aa25.07■■□□□ 1.6
SNX3-202ENST00000349379 EPHB4P54760 987 aa25.07■■□□□ 1.6
SNX3-202ENST00000349379 RBL2Q08999 1139 aa25.07■■□□□ 1.6
SNX3-202ENST00000349379 NR5A1Q13285 461 aa25.07■■□□□ 1.6
SNX3-202ENST00000349379 EARS2Q5JPH6 523 aaKnown RBP25.07■■□□□ 1.6
SNX3-202ENST00000349379 TMX3Q96JJ7 454 aa25.07■■□□□ 1.6
SNX3-202ENST00000349379 TET1Q8NFU7 2136 aa25.07■■□□□ 1.6
SNX3-202ENST00000349379 PITPNM1O00562 1244 aa25.06■■□□□ 1.6
SNX3-202ENST00000349379 MSH4O15457 936 aa25.06■■□□□ 1.6
SNX3-202ENST00000349379 SMIM10L2AP0DMW4 78 aa25.06■■□□□ 1.6
SNX3-202ENST00000349379 SMIM10L2BP0DMW5 78 aa25.06■■□□□ 1.6
SNX3-202ENST00000349379 TMEM199Q8N511 208 aa25.06■■□□□ 1.6
SNX3-202ENST00000349379 DHX38Q92620 1227 aaKnown RBP25.06■■□□□ 1.6
SNX3-202ENST00000349379 SMARCAD1Q9H4L7 1026 aa25.06■■□□□ 1.6
SNX3-202ENST00000349379 BRMS1Q9HCU9 246 aa25.06■■□□□ 1.6
SNX3-202ENST00000349379 ERAP1Q9NZ08 941 aa25.06■■□□□ 1.6
SNX3-202ENST00000349379 DDX39AO00148 427 aaKnown RBP25.05■■□□□ 1.6
SNX3-202ENST00000349379 CSF2RAP15509 400 aa25.05■■□□□ 1.6
SNX3-202ENST00000349379 ADAM17P78536 824 aa25.05■■□□□ 1.6
SNX3-202ENST00000349379 PPIGQ13427 754 aaKnown RBP eCLIP25.05■■□□□ 1.6
SNX3-202ENST00000349379 ZNF746Q6NUN9 644 aaPredicted RBP25.05■■□□□ 1.6
SNX3-202ENST00000349379 ABHD15Q6UXT9 468 aa25.05■■□□□ 1.6
SNX3-202ENST00000349379 PIK3AP1Q6ZUJ8 805 aa25.05■■□□□ 1.6
SNX3-202ENST00000349379 NEK8Q86SG6 692 aa25.05■■□□□ 1.6
SNX3-202ENST00000349379 SLC5A5Q92911 643 aa25.05■■□□□ 1.6
SNX3-202ENST00000349379 RNPEPQ9H4A4 650 aa25.05■■□□□ 1.6
SNX3-202ENST00000349379 NOD1Q9Y239 953 aa25.05■■□□□ 1.6
SNX3-202ENST00000349379 BTBD18B2RXH4 712 aa25.04■■□□□ 1.6
SNX3-202ENST00000349379 ZNF200P98182 395 aaPredicted RBP25.04■■□□□ 1.6
SNX3-202ENST00000349379 TRIM29Q14134 588 aa25.04■■□□□ 1.6
SNX3-202ENST00000349379 PLPPR4Q7Z2D5 763 aa25.04■■□□□ 1.6
SNX3-202ENST00000349379 DIS3L2Q8IYB7 885 aaKnown RBP25.04■■□□□ 1.6
SNX3-202ENST00000349379 CAGE1Q8TC20 777 aa25.04■■□□□ 1.6
SNX3-202ENST00000349379 UIMC1Q96RL1 719 aa25.04■■□□□ 1.6
SNX3-202ENST00000349379 C17orf102A2RUQ5 167 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 FAM205CA6NFA0 338 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 GCFC2P16383 781 aaKnown RBP25.03■■□□□ 1.6
SNX3-202ENST00000349379 FOSBP53539 338 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 KRT76Q01546 638 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 PTK7Q13308 1070 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 BFSP2Q13515 415 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 SHHQ15465 462 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 TRIM71Q2Q1W2 868 aaKnown RBP25.03■■□□□ 1.6
SNX3-202ENST00000349379 LRIT3Q3SXY7 679 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 C9orf50Q5SZB4 431 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 PPP4R3AQ6IN85 833 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 C16orf59Q7L2K0 433 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 SERINC5Q86VE9 423 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 ETNPPLQ8TBG4 499 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 GLG1Q92896 1179 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 VWCEQ96DN2 955 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 C8orf76Q96K31 380 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 RIT2Q99578 217 aa25.03■■□□□ 1.6
SNX3-202ENST00000349379 SIP14410 1827 aa25.02■■□□□ 1.6
SNX3-202ENST00000349379 LAMA3Q16787 3333 aa25.02■■□□□ 1.6
SNX3-202ENST00000349379 SLC37A4O43826 429 aa25.02■■□□□ 1.6
SNX3-202ENST00000349379 FXR1P51114 621 aaKnown RBP eCLIP25.02■■□□□ 1.6
SNX3-202ENST00000349379 CCL23P55773 120 aa25.02■■□□□ 1.6
SNX3-202ENST00000349379 LETM2Q2VYF4 491 aa25.02■■□□□ 1.6
SNX3-202ENST00000349379 SMAP1Q8IYB5 467 aaPredicted RBP25.02■■□□□ 1.6
SNX3-202ENST00000349379 FBXO18Q8NFZ0 1043 aa25.02■■□□□ 1.6
SNX3-202ENST00000349379 AFAP1L1Q8TED9 768 aa25.02■■□□□ 1.6
SNX3-202ENST00000349379 WNT8BQ93098 351 aa25.02■■□□□ 1.6
SNX3-202ENST00000349379 IL23AQ9NPF7 189 aa25.02■■□□□ 1.6
SNX3-202ENST00000349379 DDX25Q9UHL0 483 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms