RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 FAM160B2Q86V87 743 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 CCDC197Q8NCU1 140 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 ADAMTS1Q9UHI8 967 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 GPSM2P81274 684 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 MXRA7P84157 204 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 VSIG1Q86XK7 387 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 CDAN1Q8IWY9 1227 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 PROM2Q8N271 834 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 HPCAL4Q9UM19 191 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 PCDHA1Q9Y5I3 950 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 ZNF185O15231 689 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 GAS8O95995 478 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 SRGNP10124 158 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 DIXDC1Q155Q3 683 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 RNF10Q8N5U6 811 aaKnown RBP16.05■□□□□ 0.16
NUP50-201ENST00000347635 BEGAINQ9BUH8 593 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 BARHL2Q9NY43 387 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 ATP8A1Q9Y2Q0 1164 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 TNS2Q63HR2 1409 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 GAS7O60861 476 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 NEBLO76041 1014 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 STYK1Q6J9G0 422 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 TRIM65Q6PJ69 517 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 TMEM179Q6ZVK1 233 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 PNKPQ96T60 521 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 AP1M1Q9BXS5 423 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 PLA2G4BP0C869 781 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 STX2P32856 288 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 IREB2P48200 963 aaKnown RBP16.05■□□□□ 0.16
NUP50-201ENST00000347635 ANKRD40Q6AI12 368 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 OTUD6AQ7L8S5 288 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 CNOT10Q9H9A5 744 aaKnown RBP16.05■□□□□ 0.16
NUP50-201ENST00000347635 SPON1Q9HCB6 807 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 SNX12Q9UMY4 172 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 DAAM1Q9Y4D1 1078 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 UBE2Q2LH0YL09 131 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 RAD54LQ92698 747 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 FNBP1Q96RU3 617 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 ACTR5Q9H9F9 607 aaPredicted RBP16.05■□□□□ 0.16
NUP50-201ENST00000347635 PCDHA6Q9UN73 950 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 PCDHA8Q9Y5H6 950 aa16.05■□□□□ 0.16
NUP50-201ENST00000347635 N4BP1O75113 896 aaKnown RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 OSBPP22059 807 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 BIRC3Q13489 604 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 FAM178BQ8IXR5 827 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 NOA1Q8NC60 698 aaKnown RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 SPATA4Q8NEY3 305 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 UHMK1Q8TAS1 419 aaKnown RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 FAM84BQ96KN1 310 aaPredicted RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 CDK8P49336 464 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 TOB1P50616 345 aaPredicted RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 CYP4A11Q02928 519 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 ARHGEF16Q5VV41 709 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 RSRC2Q7L4I2 434 aaKnown RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 TMEM47Q9BQJ4 181 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 GCNT4Q9P109 453 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 FEZ2Q9UHY8 353 aaPredicted RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 GRID2IPA4D2P6 1211 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 BMP3P12645 472 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 ALAS1P13196 640 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 PRDX5P30044 214 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 NOVA2Q9UNW9 492 aaKnown RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 FCER1AP12319 257 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 PSMC2P35998 433 aaKnown RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 MYL7Q01449 175 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 UBE2SQ16763 222 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 BEND6Q5SZJ8 279 aaPredicted RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 SH3RF3Q8TEJ3 882 aaPredicted RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 IWS1Q96ST2 819 aa16.04■□□□□ 0.16
NUP50-201ENST00000347635 INTS9Q9NV88 658 aaKnown RBP16.04■□□□□ 0.16
NUP50-201ENST00000347635 CD44P16070 742 aaKnown RBP16.03■□□□□ 0.16
NUP50-201ENST00000347635 ORC2Q13416 577 aaPredicted RBP16.03■□□□□ 0.16
NUP50-201ENST00000347635 GADL1Q6ZQY3 521 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 MSANTD4Q8NCY6 345 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 LRRC1Q9BTT6 524 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.03■□□□□ 0.16
NUP50-201ENST00000347635 PASKQ96RG2 1323 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 KNDC1Q76NI1 1749 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 ASNSP08243 561 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 SUGCTQ9HAC7 445 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 POTEMA6NI47 508 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 RHOBTB3O94955 611 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 SP4Q02446 784 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 ARHGEF6Q15052 776 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 GRK7Q8WTQ7 553 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 MRRFQ96E11 262 aaKnown RBP16.03■□□□□ 0.16
NUP50-201ENST00000347635 RUNDC3BQ96NL0 473 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 CCPG1Q9ULG6 757 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 CEP83Q9Y592 693 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 TRIM66O15016 1216 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 GFPT2O94808 682 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 ZBTB7AO95365 584 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 KIF22Q14807 665 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 CCNI2Q6ZMN8 369 aaPredicted RBP16.03■□□□□ 0.16
NUP50-201ENST00000347635 STK38LQ9Y2H1 464 aa16.03■□□□□ 0.16
NUP50-201ENST00000347635 GAP43P17677 238 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 ERVK-24P63145 666 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 STRN3Q13033 797 aa16.02■□□□□ 0.16
NUP50-201ENST00000347635 FAM186BQ8IYM0 893 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms