RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 RIPK1Q13546 671 aa16.77■□□□□ 0.27
LMNA-201ENST00000347559 FAM47AQ5JRC9 791 aa16.77■□□□□ 0.27
LMNA-201ENST00000347559 CNNM4Q6P4Q7 775 aa16.77■□□□□ 0.27
LMNA-201ENST00000347559 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.77■□□□□ 0.27
LMNA-201ENST00000347559 KLHL29Q96CT2 875 aa16.77■□□□□ 0.27
LMNA-201ENST00000347559 PCDHGC5Q9Y5F6 944 aa16.77■□□□□ 0.27
LMNA-201ENST00000347559 MYH7BA7E2Y1 1941 aa16.77■□□□□ 0.27
LMNA-201ENST00000347559 CFAP73A6NFT4 308 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 SERPING1P05155 500 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 GSTA1P08263 222 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 SLC4A8Q2Y0W8 1093 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 NBPF20Q3BBV1 942 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 VGLL2Q8N8G2 317 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 ZBTB38Q8NAP3 1195 aaPredicted RBP16.76■□□□□ 0.27
LMNA-201ENST00000347559 PGRMC1O00264 195 aaKnown RBP16.76■□□□□ 0.27
LMNA-201ENST00000347559 MYL1P05976 194 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 SLCO1A2P46721 670 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 SLC5A4Q9NY91 659 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 TMEM59LQ9UK28 342 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 MPHOSPH10O00566 681 aaKnown RBP16.76■□□□□ 0.27
LMNA-201ENST00000347559 BCAMP50895 628 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 RWDD2BP57060 319 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 ZNF268Q14587 947 aaPredicted RBP16.76■□□□□ 0.27
LMNA-201ENST00000347559 TAF11Q15544 211 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 MGARPQ8TDB4 240 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 SCFD2Q8WU76 684 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 AZI2Q9H6S1 392 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 ARHGEF10LQ9HCE6 1279 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 MEGF6O75095 1541 aa16.76■□□□□ 0.27
LMNA-201ENST00000347559 KRT16P08779 473 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 CALM1P0DP23 149 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 CALM2P0DP24 149 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 CALM3P0DP25 149 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 IFI35P80217 286 aaPredicted RBP16.75■□□□□ 0.27
LMNA-201ENST00000347559 KCNMA1Q12791 1236 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 PUM3Q15397 648 aaKnown RBP16.75■□□□□ 0.27
LMNA-201ENST00000347559 CHRNA2Q15822 529 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 ANKRD20A2Q5SQ80 823 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 ANKRD20A1Q5TYW2 823 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 ANKRD20A3Q5VUR7 823 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 MTA3Q9BTC8 594 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 OSBPL1AQ9BXW6 950 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 TRIM33Q9UPN9 1127 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 ATP6V0A2Q9Y487 856 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 PARP4Q9UKK3 1724 aaKnown RBP16.75■□□□□ 0.27
LMNA-201ENST00000347559 NCALDP61601 193 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 EVX2Q03828 476 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 SLC18A3Q16572 532 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 PFKFB3Q16875 520 aaPredicted RBP16.75■□□□□ 0.27
LMNA-201ENST00000347559 ADGRA1Q86SQ6 560 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 DAAM2Q86T65 1068 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 METTL13Q8N6R0 699 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 CCSER1Q9C0I3 900 aa16.75■□□□□ 0.27
LMNA-201ENST00000347559 CORO1CQ9ULV4 474 aaPredicted RBP16.75■□□□□ 0.27
LMNA-201ENST00000347559 UTP11Q9Y3A2 253 aaKnown RBP16.75■□□□□ 0.27
LMNA-201ENST00000347559 CALML3P27482 149 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 PRPF4BQ13523 1007 aaKnown RBP16.74■□□□□ 0.27
LMNA-201ENST00000347559 CENPPQ6IPU0 288 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 FMO2Q99518 471 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 LMTK3Q96Q04 1460 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 ASAP2O43150 1006 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 LINGO3P0C6S8 592 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 CCND1P24385 295 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 COPB2P35606 906 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 TECP42680 631 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 CTSWP56202 376 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 ITIH4Q14624 930 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 LRRC14Q15048 493 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 CCDC38Q502W7 563 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 PIGWQ7Z7B1 504 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 HOOK3Q86VS8 718 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 GLIS3Q8NEA6 775 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 DYDC1Q8WWB3 177 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 TLCD1Q96CP7 247 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 CHD4Q14839 1912 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 RGS16O15492 202 aaPredicted RBP16.74■□□□□ 0.27
LMNA-201ENST00000347559 RARAP10276 462 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 SLC5A1P13866 664 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 ABL2P42684 1182 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 SLMAPQ14BN4 828 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 HOMER3Q9NSC5 361 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 IRAK4Q9NWZ3 460 aa16.74■□□□□ 0.27
LMNA-201ENST00000347559 IRS4O14654 1257 aaPredicted RBP16.73■□□□□ 0.27
LMNA-201ENST00000347559 PECAM1P16284 738 aaPredicted RBP16.73■□□□□ 0.27
LMNA-201ENST00000347559 ATP2A2P16615 1042 aaKnown RBP16.73■□□□□ 0.27
LMNA-201ENST00000347559 LETM2Q2VYF4 491 aa16.73■□□□□ 0.27
LMNA-201ENST00000347559 KIF6Q6ZMV9 814 aa16.73■□□□□ 0.27
LMNA-201ENST00000347559 RBAK-RBAKDNI3L0D1 243 aa16.73■□□□□ 0.27
LMNA-201ENST00000347559 SMIM24O75264 130 aa16.73■□□□□ 0.27
LMNA-201ENST00000347559 CTCFP49711 727 aaPredicted RBP16.73■□□□□ 0.27
LMNA-201ENST00000347559 USP11P51784 963 aa16.73■□□□□ 0.27
LMNA-201ENST00000347559 AMPD3Q01432 767 aa16.73■□□□□ 0.27
LMNA-201ENST00000347559 BLMHQ13867 455 aa16.73■□□□□ 0.27
LMNA-201ENST00000347559 ATXN2LQ8WWM7 1075 aaKnown RBP16.73■□□□□ 0.27
LMNA-201ENST00000347559 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.73■□□□□ 0.275e-7■■□□□ 13.2
LMNA-201ENST00000347559 CEP72Q9P209 647 aa16.73■□□□□ 0.27
LMNA-201ENST00000347559 PNMA3Q9UL41 463 aa16.73■□□□□ 0.27
LMNA-201ENST00000347559 TJP1Q07157 1748 aa16.73■□□□□ 0.27
LMNA-201ENST00000347559 MYH2Q9UKX2 1941 aa16.73■□□□□ 0.27
LMNA-201ENST00000347559 AFF2P51816 1311 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms