RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 NEDD9Q14511 834 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 KARSQ15046 597 aaKnown RBP21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 IQSEC1Q6DN90 963 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 MIER3Q7Z3K6 550 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 TRMT44Q8IYL2 757 aaKnown RBP21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 FMR1NBQ8N0W7 255 aaPredicted RBP21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 SNX29Q8TEQ0 813 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 PLIN2Q99541 437 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 EIF2AK1Q9BQI3 630 aaKnown RBP21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 RAB34Q9BZG1 259 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 FAM13BQ9NYF5 915 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 RGL1Q9NZL6 768 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 KCNH3Q9ULD8 1083 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 SPATA31C1P0DKV0 1188 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 UBA7P41226 1012 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 PRMT2P55345 433 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 ACTR2P61160 394 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 KRT76Q01546 638 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 EPHA7Q15375 998 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 ZRSR1Q15695 479 aaKnown RBP21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 ZNF746Q6NUN9 644 aaPredicted RBP21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 PDILTQ8N807 584 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 DYDC2Q96IM9 177 aa21.36■■□□□ 1.01
CHMP4A-201ENST00000347519 A0A087WWV3 80 aa21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 GSTTP1A0A1W2PQM5 241 aa21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 CCT6AP40227 531 aaKnown RBP21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 CYP4A11Q02928 519 aa21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 TNFAIP2Q03169 654 aa21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 DUSP28Q4G0W2 176 aa21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 METTL7BQ6UX53 244 aa21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 DHX37Q8IY37 1157 aaKnown RBP21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 GIMAP8Q8ND71 665 aaPredicted RBP21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 PXYLP1Q8TE99 480 aa21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 MLXIPQ9HAP2 919 aa21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 DISC1Q9NRI5 854 aa21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 WRAP73Q9P2S5 460 aaPredicted RBP21.35■■□□□ 1.01
CHMP4A-201ENST00000347519 POTEB3A0JP26 581 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 POLR2DO15514 142 aaKnown RBP21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 SLITRK3O94933 977 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 HMGCRP04035 888 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 PRKAR2AP13861 404 aaKnown RBP21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 CCND3P30281 292 aaPredicted RBP21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 SYKP43405 635 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 IRX5P78411 483 aaPredicted RBP21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 FAM160A1Q05DH4 1040 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 CTTNQ14247 550 aaKnown RBP21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 UGCGQ16739 394 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 HSDL1Q3SXM5 330 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 KRT79Q5XKE5 535 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 POTEBQ6S5H4 581 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 ABHD15Q6UXT9 468 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 CCDC73Q6ZRK6 1079 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 CATSPER3Q86XQ3 398 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 HSD17B14Q9BPX1 270 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 NRBP1Q9UHY1 535 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 GNEQ9Y223 722 aaKnown RBP21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 PTPN22Q9Y2R2 807 aa21.34■■□□□ 1.01
CHMP4A-201ENST00000347519 WDR64B1ANS9 1081 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 ZNF202O95125 648 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 ATG7O95352 703 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 GH1P01241 217 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 PLCG1P19174 1290 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 E2F4Q16254 413 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 TMEM119Q4V9L6 283 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 NAALADL2Q58DX5 795 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 HYIQ5T013 277 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 MAP3K21Q5TCX8 1036 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 KCNK18Q7Z418 384 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 BANK1Q8NDB2 785 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 DHX58Q96C10 678 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 GPR20Q99678 358 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 POLR3CQ9BUI4 534 aaPredicted RBP21.33■■□□□ 1
CHMP4A-201ENST00000347519 DACT1Q9NYF0 836 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 FAM184BQ9ULE4 1060 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 SAMM50Q9Y512 469 aa21.33■■□□□ 1
CHMP4A-201ENST00000347519 TRAK2O60296 914 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 MBD3O95983 291 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 INHAP05111 366 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 SUPT20HL2P0C7V6 817 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 PTMSP20962 102 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 RPA1P27694 616 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 JAK3P52333 1124 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 LONRF3Q496Y0 759 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 POTEGQ6S5H5 508 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 SLAIN1Q8ND83 568 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 OR6J1Q8NGC5 347 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 ERMNQ8TAM6 284 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 SPATA33Q96N06 139 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 PCYT2Q99447 389 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 SERTAD1Q9UHV2 236 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 PCDHA10Q9Y5I2 948 aa21.32■■□□□ 1
CHMP4A-201ENST00000347519 HTTP42858 3142 aa21.31■■□□□ 1
CHMP4A-201ENST00000347519 DYNC1LI2O43237 492 aaPredicted RBP21.31■■□□□ 1
CHMP4A-201ENST00000347519 ACTN4O43707 911 aaKnown RBP21.31■■□□□ 1
CHMP4A-201ENST00000347519 SFNP31947 248 aa21.31■■□□□ 1
CHMP4A-201ENST00000347519 GRK4P32298 578 aa21.31■■□□□ 1
CHMP4A-201ENST00000347519 TXLNAP40222 546 aa21.31■■□□□ 1
CHMP4A-201ENST00000347519 LAMC2Q13753 1193 aa21.31■■□□□ 1
CHMP4A-201ENST00000347519 CCDC60Q8IWA6 550 aaPredicted RBP21.31■■□□□ 1
CHMP4A-201ENST00000347519 SMAP1Q8IYB5 467 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms