RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 TMEM240Q5SV17 173 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 KRT25Q7Z3Z0 450 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 DAGLBQ8NCG7 672 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 CYP2W1Q8TAV3 490 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 RASGRP4Q8TDF6 673 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 SCLYQ96I15 445 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 ZNF577Q9BSK1 485 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 LIMCH1Q9UPQ0 1083 aa17.91■□□□□ 0.46
TSPAN4-201ENST00000346501 CCDC194A0A1B0GVG4 234 aa17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 IPO5O00410 1097 aaKnown RBP17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 SOX1O00570 391 aaPredicted RBP17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 IQCF3P0C7M6 154 aa17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 SELPP16109 830 aa17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 NONOQ15233 471 aaKnown RBP eCLIP17.9■□□□□ 0.469e-6■■■□□ 19
TSPAN4-201ENST00000346501 FAM160B1Q5W0V3 765 aa17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 DEFB128Q7Z7B8 93 aa17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 TRIM50Q86XT4 487 aa17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 GTF3C6Q969F1 213 aa17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 ZSCAN31Q96LW9 406 aaPredicted RBP17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 WNT8AQ9H1J5 351 aa17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 NRCAMQ92823 1304 aa17.9■□□□□ 0.46
TSPAN4-201ENST00000346501 GSTTP1A0A1W2PQM5 241 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 ZBBXA8MT70 800 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 FAM86B1E9PN63 330 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 BACH1O14867 736 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 FAM86B2P0C5J1 330 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 CIITAP33076 1130 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 SLC26A2P50443 739 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 ACTR2P61160 394 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 ME3Q16798 604 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 MIS18BP1Q6P0N0 1132 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 LRRC8DQ7L1W4 858 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 RSPH3Q86UC2 560 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 NECAB1Q8N987 351 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 TBCKQ8TEA7 893 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 HERVK_113Q902F9 699 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 NAP1L4Q99733 375 aaKnown RBP17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 RNPEPQ9H4A4 650 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 EMSYQ7Z589 1322 aa17.89■□□□□ 0.45
TSPAN4-201ENST00000346501 RRN3P2A6NIE6 340 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 DDX39AO00148 427 aaKnown RBP17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 ST18O60284 1047 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 CAND2O75155 1236 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 RPLP2P05387 115 aaKnown RBP17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 MARK3P27448 753 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 STAT5BP51692 787 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 KRT76Q01546 638 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 RBL2Q08999 1139 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 PPFIA1Q13136 1202 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 ZNF697Q5TEC3 545 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 OTOP2Q7RTS6 562 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 SETD4Q9NVD3 440 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 TRPC6Q9Y210 931 aa17.88■□□□□ 0.45
TSPAN4-201ENST00000346501 DNAH12Q6ZR08 3092 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 IGLV3-22A0A075B6J6 115 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 CKBP12277 381 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 THPOP40225 353 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 RABEP1Q15276 862 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 PLPPR4Q7Z2D5 763 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 SERINC5Q86VE9 423 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 DEFB123Q8N688 67 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 CRYGNQ8WXF5 182 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 AIFM3Q96NN9 605 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 PHF20Q9BVI0 1012 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 SH2B1Q9NRF2 756 aaPredicted RBP17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 KCNJ14Q9UNX9 436 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 SAMM50Q9Y512 469 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 SLC4A7Q9Y6M7 1214 aa17.87■□□□□ 0.45
TSPAN4-201ENST00000346501 MARCH6O60337 910 aa17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 LGR5O75473 907 aa17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 RBM25P49756 843 aaKnown RBP17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 ZNF200P98182 395 aaPredicted RBP17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 ITGB3BPQ13352 177 aaPredicted RBP17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 FAM109BQ6ICB4 259 aaPredicted RBP17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 ZNF746Q6NUN9 644 aaPredicted RBP17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 TAF2Q6P1X5 1199 aa17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 C16orf59Q7L2K0 433 aa17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 CKAP2LQ8IYA6 745 aa17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 SMAP1Q8IYB5 467 aaPredicted RBP17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 MSRAQ9UJ68 235 aa17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 DOCK5Q9H7D0 1870 aa17.86■□□□□ 0.45
TSPAN4-201ENST00000346501 RSPH10B2B2RC85 870 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 TREHO43280 583 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 GAS7O60861 476 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 EFCAB14O75071 495 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 PSAPP07602 524 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 RSPH10BP0C881 870 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 KRT2P35908 639 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 KCNJ6P48051 423 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 SAFBQ15424 915 aaKnown RBP eCLIP17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 RAB30Q15771 203 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 GRIK4Q16099 956 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 PDXDC2PQ6P474 469 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 MOXD1Q6UVY6 613 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 NSUN7Q8NE18 718 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 LMBR1Q8WVP7 490 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 DHX38Q92620 1227 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 RIT2Q99578 217 aa17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 LLPHQ9BRT6 129 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-201ENST00000346501 TEKT3Q9BXF9 490 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms