RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 TLR2O60603 784 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 HOXD13P35453 343 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 MARSP56192 900 aaKnown RBP17.07■□□□□ 0.32
UPF3B-202ENST00000345865 HAUS3Q68CZ6 603 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 ZC3H3Q8IXZ2 948 aaKnown RBP17.07■□□□□ 0.32
UPF3B-202ENST00000345865 SECISBP2LQ93073 1101 aaKnown RBP17.07■□□□□ 0.32
UPF3B-202ENST00000345865 CNKSR1Q969H4 720 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 SH2D4AQ9H788 454 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
UPF3B-202ENST00000345865 VAV3Q9UKW4 847 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 PITPNM2Q9BZ72 1349 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 TCP10L2B9ZVM9 353 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 EML1O00423 815 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 SLC26A4O43511 780 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 KRT18P05783 430 aaKnown RBP17.07■□□□□ 0.32
UPF3B-202ENST00000345865 OAS2P29728 719 aaKnown RBP17.07■□□□□ 0.32
UPF3B-202ENST00000345865 CIITAP33076 1130 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 CYP4A11Q02928 519 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 CC2D2BQ6DHV5 1058 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 SYT2Q8N9I0 419 aaPredicted RBP17.07■□□□□ 0.32
UPF3B-202ENST00000345865 REEP2Q9BRK0 252 aa17.07■□□□□ 0.32
UPF3B-202ENST00000345865 CLRN2A0PK11 232 aa17.06■□□□□ 0.32
UPF3B-202ENST00000345865 ANO9A1A5B4 782 aa17.06■□□□□ 0.32
UPF3B-202ENST00000345865 AKR1B10O60218 316 aa17.06■□□□□ 0.32
UPF3B-202ENST00000345865 MOCS3O95396 460 aa17.06■□□□□ 0.32
UPF3B-202ENST00000345865 FOSP01100 380 aaPredicted RBP17.06■□□□□ 0.32
UPF3B-202ENST00000345865 GFPT1Q06210 699 aaPredicted RBP17.06■□□□□ 0.32
UPF3B-202ENST00000345865 ADAM9Q13443 819 aa17.06■□□□□ 0.32
UPF3B-202ENST00000345865 CACNA2D4Q7Z3S7 1137 aa17.06■□□□□ 0.32
UPF3B-202ENST00000345865 DEF6Q9H4E7 631 aa17.06■□□□□ 0.32
UPF3B-202ENST00000345865 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.06■□□□□ 0.32
UPF3B-202ENST00000345865 RSPH10B2B2RC85 870 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 H3BQF6 201 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 PPIP5K2O43314 1243 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 C21orf2O43822 256 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 RSPH10BP0C881 870 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 POLD1P28340 1107 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 FAM83BQ5T0W9 1011 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 TSGA10Q9BZW7 698 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.05■□□□□ 0.32
UPF3B-202ENST00000345865 RGL1Q9NZL6 768 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 DNM3Q9UQ16 869 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 IGLV3-22A0A075B6J6 115 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 USP14P54578 494 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 SFR1Q86XK3 245 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 CDAN1Q8IWY9 1227 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 ANKRD13CQ8N6S4 541 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 FAM20AQ96MK3 541 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 LSM14BQ9BX40 385 aaKnown RBP17.05■□□□□ 0.32
UPF3B-202ENST00000345865 EDEM3Q9BZQ6 932 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 CEP72Q9P209 647 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.05■□□□□ 0.32
UPF3B-202ENST00000345865 ATAD5Q96QE3 1844 aa17.05■□□□□ 0.32
UPF3B-202ENST00000345865 POLR2FP61218 127 aaKnown RBP17.04■□□□□ 0.32
UPF3B-202ENST00000345865 WDR93Q6P2C0 686 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 EPM2AIP1Q7L775 607 aaPredicted RBP17.04■□□□□ 0.32
UPF3B-202ENST00000345865 WDR18Q9BV38 432 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 JADE2Q9NQC1 790 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 PIK3CDO00329 1044 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 USO1O60763 962 aaKnown RBP17.04■□□□□ 0.32
UPF3B-202ENST00000345865 KIF20AO95235 890 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 GNA14O95837 355 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 CYP3A4P08684 503 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 MYBP10242 640 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 MAGEA1P43355 309 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 MAPK8IP2Q13387 824 aaPredicted RBP17.04■□□□□ 0.32
UPF3B-202ENST00000345865 MCTP2Q6DN12 878 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 ERMNQ8TAM6 284 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 DRC1Q96MC2 740 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 RUSC1Q9BVN2 902 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 BHMT2Q9H2M3 363 aa17.04■□□□□ 0.32
UPF3B-202ENST00000345865 COL2A1P02458 1487 aaPredicted RBP17.04■□□□□ 0.32
UPF3B-202ENST00000345865 PRPF6O94906 941 aaKnown RBP17.03■□□□□ 0.32
UPF3B-202ENST00000345865 NR2F2P24468 414 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 STAT2P52630 851 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 EDRF1Q3B7T1 1238 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 CREG2Q8IUH2 290 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 TRIM58Q8NG06 486 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 COG1Q8WTW3 980 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 EIF2AK1Q9BQI3 630 aaKnown RBP17.03■□□□□ 0.32
UPF3B-202ENST00000345865 SNX12Q9UMY4 172 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 SSU72P8A0A1W2PR75 194 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 PJA2O43164 708 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 RASSF7Q02833 373 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 KCNA1Q09470 495 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 KCNH2Q12809 1159 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 DPY19L2P1Q6NXN4 242 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 HDXQ7Z353 690 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 HERC5Q9UII4 1024 aaKnown RBP17.03■□□□□ 0.32
UPF3B-202ENST00000345865 TRAF3IP3Q9Y228 551 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 JRKLQ9Y4A0 524 aa17.03■□□□□ 0.32
UPF3B-202ENST00000345865 PSME4Q14997 1843 aa17.02■□□□□ 0.32
UPF3B-202ENST00000345865 ERLIN1O75477 346 aa17.02■□□□□ 0.32
UPF3B-202ENST00000345865 RAD17O75943 681 aa17.02■□□□□ 0.32
UPF3B-202ENST00000345865 CFBP00751 764 aa17.02■□□□□ 0.32
UPF3B-202ENST00000345865 GYS2P54840 703 aa17.02■□□□□ 0.32
UPF3B-202ENST00000345865 KNOP1Q1ED39 458 aaKnown RBP17.02■□□□□ 0.32
UPF3B-202ENST00000345865 TDRD12Q587J7 1177 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms