RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 TMEM266Q2M3C6 531 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 ZNF511Q8NB15 262 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 CHURC1Q8WUH1 139 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 CRYGNQ8WXF5 182 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 TBC1D5Q92609 795 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 PNMA5Q96PV4 448 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 FEZ1Q99689 392 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 RANBP17Q9H2T7 1088 aaKnown RBP10.35□□□□□ -0.75
ATG4A-202ENST00000345734 SH2D4AQ9H788 454 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 FZD1Q9UP38 647 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 GDAQ9Y2T3 454 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 GCFC2P16383 781 aaKnown RBP10.34□□□□□ -0.75
ATG4A-202ENST00000345734 INPP5BP32019 993 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 USP11P51784 963 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 ARHGAP4P98171 946 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 DHX8Q14562 1220 aaKnown RBP10.34□□□□□ -0.75
ATG4A-202ENST00000345734 ANGEL2Q5VTE6 544 aaKnown RBP10.34□□□□□ -0.75
ATG4A-202ENST00000345734 TMC6Q7Z403 805 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 IL21Q9HBE4 155 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 CTNND2Q9UQB3 1225 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 MAPK8IP1Q9UQF2 711 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 SYNRGQ9UMZ2 1314 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 CYP3A7-CYP3A51PA0A087WV96 503 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 SPDYE3A6NKU9 549 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 H7C1D1 291 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 MARCH6O60337 910 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 CYP3A7P24462 503 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 PDIA5Q14554 519 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 ECM1Q16610 540 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 ZNF658Q5TYW1 1059 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-202ENST00000345734 FCHSD1Q86WN1 690 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 DHX37Q8IY37 1157 aaKnown RBP10.34□□□□□ -0.75
ATG4A-202ENST00000345734 SNX29Q8TEQ0 813 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 CALML4Q96GE6 196 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 MBOAT7Q96N66 472 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 CUEDC2Q9H467 287 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 BLOC1S4Q9NUP1 217 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 INTS13Q9NVM9 706 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 TMEM51Q9NW97 253 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 RMND1Q9NWS8 449 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 FEM1BQ9UK73 627 aa10.34□□□□□ -0.75
ATG4A-202ENST00000345734 DOCK1Q14185 1865 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 CTNND1O60716 968 aaKnown RBP10.33□□□□□ -0.76
ATG4A-202ENST00000345734 PLA2G6O60733 806 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 CDK11BP21127 795 aaKnown RBP10.33□□□□□ -0.76
ATG4A-202ENST00000345734 SREBF1P36956 1147 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 PRR16Q569H4 304 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 CT47A1Q5JQC4 288 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-202ENST00000345734 FAM160B2Q86V87 743 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 ANKMY2Q8IV38 441 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 LRRC8AQ8IWT6 810 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 KIAA1524Q8TCG1 905 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 RAB34Q9BZG1 259 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 TRIM9Q9C026 710 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 FHDC1Q9C0D6 1143 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-202ENST00000345734 MAGEF1Q9HAY2 307 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 SPON1Q9HCB6 807 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 KCNMB3Q9NPA1 279 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 GPRC5DQ9NZD1 345 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 PCDHA12Q9UN75 941 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 FAM86B1E9PN63 330 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 CFBP00751 764 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 FOSP01100 380 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-202ENST00000345734 FAM86B2P0C5J1 330 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 LMNB1P20700 586 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 STAT3P40763 770 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 EPS15P42566 896 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 PRCPP42785 496 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 HIRAP54198 1017 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-202ENST00000345734 NOLC1Q14978 699 aaKnown RBP eCLIP10.33□□□□□ -0.76
ATG4A-202ENST00000345734 SPATA1Q5VX52 437 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 KRT79Q5XKE5 535 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 KCNK18Q7Z418 384 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 CYP2W1Q8TAV3 490 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 LENG9Q96B70 501 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 NAP1L4Q99733 375 aaKnown RBP10.33□□□□□ -0.76
ATG4A-202ENST00000345734 C7orf25Q9BPX7 421 aa10.33□□□□□ -0.76
ATG4A-202ENST00000345734 CBFA2T2O43439 604 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 MYL1P05976 194 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 ASIC1P78348 528 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 KCNB1Q14721 858 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 TMEM119Q4V9L6 283 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 MOXD1Q6UVY6 613 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 SND1Q7KZF4 910 aaKnown RBP eCLIP10.32□□□□□ -0.76
ATG4A-202ENST00000345734 BPHLQ86WA6 291 aaPredicted RBP10.32□□□□□ -0.76
ATG4A-202ENST00000345734 LDHDQ86WU2 507 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 ETNPPLQ8TBG4 499 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 NELFBQ8WX92 580 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 ZKSCAN4Q969J2 545 aaPredicted RBP10.32□□□□□ -0.76
ATG4A-202ENST00000345734 SLC10A4Q96EP9 437 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 CDK5RAP3Q96JB5 506 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 AGBL1Q96MI9 1066 aa10.32□□□□□ -0.76
ATG4A-202ENST00000345734 MYMKA6NI61 221 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 GCOM1H8Y6P7 765 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-202ENST00000345734 OFD1O75665 1012 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 RHOBTB3O94955 611 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 POLR2MP0CAP2 368 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 PAK1Q13153 545 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 Q4G0T1 1027 aa10.31□□□□□ -0.76
ATG4A-202ENST00000345734 MCTP2Q6DN12 878 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms