RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 TPM2P07951 284 aa28.08■■■□□ 2.09
TRADD-201ENST00000345057 MRPS9P82933 396 aaKnown RBP28.08■■■□□ 2.09
TRADD-201ENST00000345057 PPIL2Q13356 520 aa28.08■■■□□ 2.09
TRADD-201ENST00000345057 EAPPQ56P03 285 aaPredicted RBP28.08■■■□□ 2.09
TRADD-201ENST00000345057 IL31RAQ8NI17 732 aa28.08■■■□□ 2.09
TRADD-201ENST00000345057 NACC1Q96RE7 527 aa28.08■■■□□ 2.09
TRADD-201ENST00000345057 AGO4Q9HCK5 861 aaKnown RBP28.08■■■□□ 2.09
TRADD-201ENST00000345057 SPTLC3Q9NUV7 552 aa28.08■■■□□ 2.09
TRADD-201ENST00000345057 FBXO40Q9UH90 709 aa28.08■■■□□ 2.09
TRADD-201ENST00000345057 SKILP12757 684 aa28.07■■■□□ 2.08
TRADD-201ENST00000345057 PABPC4Q13310 644 aaKnown RBP eCLIP28.07■■■□□ 2.08
TRADD-201ENST00000345057 MYOCDQ8IZQ8 938 aa28.07■■■□□ 2.08
TRADD-201ENST00000345057 OTUD5Q96G74 571 aa28.07■■■□□ 2.08
TRADD-201ENST00000345057 TSG101Q99816 390 aa28.07■■■□□ 2.08
TRADD-201ENST00000345057 SRRTQ9BXP5 876 aaKnown RBP28.07■■■□□ 2.08
TRADD-201ENST00000345057 TCEAL9Q9UHQ7 104 aa28.07■■■□□ 2.08
TRADD-201ENST00000345057 N4BP3O15049 544 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 STAM2O75886 525 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 PMS1P54277 932 aaKnown RBP28.06■■■□□ 2.08
TRADD-201ENST00000345057 PLS1Q14651 629 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 LBX2Q6XYB7 198 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 GADL1Q6ZQY3 521 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 TPH2Q8IWU9 490 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 DYDC2Q96IM9 177 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 RGL1Q9NZL6 768 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 KCND2Q9NZV8 630 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 KCNH4Q9UQ05 1017 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 UNCXA6NJT0 531 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 IRF6O14896 467 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 COPB1P53618 953 aaKnown RBP28.06■■■□□ 2.08
TRADD-201ENST00000345057 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.06■■■□□ 2.08
TRADD-201ENST00000345057 NLRX1Q86UT6 975 aa28.06■■■□□ 2.08
TRADD-201ENST00000345057 MYCLP12524 364 aaPredicted RBP28.05■■■□□ 2.08
TRADD-201ENST00000345057 PSMC6P62333 389 aa28.05■■■□□ 2.08
TRADD-201ENST00000345057 IRX3P78415 501 aaPredicted RBP28.05■■■□□ 2.08
TRADD-201ENST00000345057 HERC4Q5GLZ8 1057 aaPredicted RBP28.05■■■□□ 2.08
TRADD-201ENST00000345057 TREML2Q5T2D2 321 aa28.05■■■□□ 2.08
TRADD-201ENST00000345057 ANKRD40Q6AI12 368 aa28.05■■■□□ 2.08
TRADD-201ENST00000345057 ARMCX5Q6P1M9 558 aa28.05■■■□□ 2.08
TRADD-201ENST00000345057 MIER3Q7Z3K6 550 aa28.05■■■□□ 2.08
TRADD-201ENST00000345057 GPRASP2Q96D09 838 aa28.05■■■□□ 2.08
TRADD-201ENST00000345057 DUSP9Q99956 384 aaKnown RBP28.05■■■□□ 2.08
TRADD-201ENST00000345057 BHMT2Q9H2M3 363 aa28.05■■■□□ 2.08
TRADD-201ENST00000345057 CYP39A1Q9NYL5 469 aa28.05■■■□□ 2.08
TRADD-201ENST00000345057 ITIH6Q6UXX5 1313 aa28.05■■■□□ 2.08
TRADD-201ENST00000345057 COBLO75128 1261 aa28.04■■■□□ 2.08
TRADD-201ENST00000345057 CCZ1BP86790 482 aa28.04■■■□□ 2.08
TRADD-201ENST00000345057 CCZ1P86791 482 aaPredicted RBP28.04■■■□□ 2.08
TRADD-201ENST00000345057 TBX2Q13207 712 aaPredicted RBP28.04■■■□□ 2.08
TRADD-201ENST00000345057 CTTNQ14247 550 aaKnown RBP28.04■■■□□ 2.08
TRADD-201ENST00000345057 ARID5BQ14865 1188 aa28.04■■■□□ 2.08
TRADD-201ENST00000345057 ARSHQ5FYA8 562 aa28.04■■■□□ 2.08
TRADD-201ENST00000345057 VSIG10LQ86VR7 867 aa28.04■■■□□ 2.08
TRADD-201ENST00000345057 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.04■■■□□ 2.08
TRADD-201ENST00000345057 NR3C2P08235 984 aa28.04■■■□□ 2.08
TRADD-201ENST00000345057 GIT2Q14161 759 aa28.04■■■□□ 2.08
TRADD-201ENST00000345057 FASTKD5Q7L8L6 764 aaKnown RBP28.04■■■□□ 2.08
TRADD-201ENST00000345057 CNKSR2Q8WXI2 1034 aa28.04■■■□□ 2.08
TRADD-201ENST00000345057 HPS3Q969F9 1004 aa28.04■■■□□ 2.08
TRADD-201ENST00000345057 ZFP91Q96JP5 570 aaPredicted RBP28.04■■■□□ 2.08
TRADD-201ENST00000345057 CDHR1Q96JP9 859 aa28.04■■■□□ 2.08
TRADD-201ENST00000345057 A0A0G2JMZ2 1700 aa28.04■■■□□ 2.08
TRADD-201ENST00000345057 PFASO15067 1338 aa28.03■■■□□ 2.08
TRADD-201ENST00000345057 P4HBP07237 508 aaKnown RBP28.03■■■□□ 2.08
TRADD-201ENST00000345057 KCNJ6P48051 423 aa28.03■■■□□ 2.08
TRADD-201ENST00000345057 RIOX2Q8IUF8 465 aa28.03■■■□□ 2.08
TRADD-201ENST00000345057 A1CFQ9NQ94 594 aaKnown RBP28.03■■■□□ 2.08
TRADD-201ENST00000345057 LOXHD1Q8IVV2 1947 aa28.03■■■□□ 2.08
TRADD-201ENST00000345057 DHX15O43143 795 aaKnown RBP28.02■■■□□ 2.08
TRADD-201ENST00000345057 TBCAO75347 108 aaKnown RBP28.02■■■□□ 2.08
TRADD-201ENST00000345057 GAP43P17677 238 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 PBX1P40424 430 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 IRF2BP1Q8IU81 584 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 CLMNQ96JQ2 1002 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 SEMA6BQ9H3T3 888 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 AGTPBP1Q9UPW5 1226 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.02■■■□□ 2.08
TRADD-201ENST00000345057 COL4A3BPQ9Y5P4 624 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 OFD1O75665 1012 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 TPM1P09493 284 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 SFNP31947 248 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 JAK3P52333 1124 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 CREBRFQ8IUR6 639 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 DNERQ8NFT8 737 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 IWS1Q96ST2 819 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 LXNQ9BS40 222 aa28.02■■■□□ 2.08
TRADD-201ENST00000345057 TESPA1A2RU30 521 aaPredicted RBP28.01■■■□□ 2.07
TRADD-201ENST00000345057 COPB2P35606 906 aa28.01■■■□□ 2.07
TRADD-201ENST00000345057 KRT76Q01546 638 aa28.01■■■□□ 2.07
TRADD-201ENST00000345057 TRIM14Q14142 442 aa28.01■■■□□ 2.07
TRADD-201ENST00000345057 PPFIBP1Q86W92 1011 aa28.01■■■□□ 2.07
TRADD-201ENST00000345057 RDM1Q8NG50 284 aa28.01■■■□□ 2.07
TRADD-201ENST00000345057 REEP2Q9BRK0 252 aa28.01■■■□□ 2.07
TRADD-201ENST00000345057 VPS16Q9H269 839 aa28.01■■■□□ 2.07
TRADD-201ENST00000345057 ZSWIM4Q9H7M6 989 aa28.01■■■□□ 2.07
TRADD-201ENST00000345057 TAB2Q9NYJ8 693 aa28.01■■■□□ 2.07
TRADD-201ENST00000345057 PCDHA2Q9Y5H9 948 aa28.01■■■□□ 2.07
TRADD-201ENST00000345057 TEX33O43247 280 aa28■■■□□ 2.07
TRADD-201ENST00000345057 ITGB3BPQ13352 177 aaPredicted RBP28■■■□□ 2.07
TRADD-201ENST00000345057 GNPTABQ3T906 1256 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms