RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 MOXD1Q6UVY6 613 aa23.65■■□□□ 1.38
CCDC38-201ENST00000344280 SLC30A10Q6XR72 485 aa23.65■■□□□ 1.38
CCDC38-201ENST00000344280 CAGE1Q8TC20 777 aa23.65■■□□□ 1.38
CCDC38-201ENST00000344280 COG1Q8WTW3 980 aa23.65■■□□□ 1.38
CCDC38-201ENST00000344280 PRMT6Q96LA8 375 aaPredicted RBP23.65■■□□□ 1.38
CCDC38-201ENST00000344280 LSM14BQ9BX40 385 aaKnown RBP23.65■■□□□ 1.38
CCDC38-201ENST00000344280 LRRIQ3A6PVS8 624 aaPredicted RBP23.64■■□□□ 1.38
CCDC38-201ENST00000344280 GIT2Q14161 759 aa23.64■■□□□ 1.38
CCDC38-201ENST00000344280 TRIM58Q8NG06 486 aa23.64■■□□□ 1.38
CCDC38-201ENST00000344280 GMCL1Q96IK5 515 aa23.64■■□□□ 1.38
CCDC38-201ENST00000344280 CEP63Q96MT8 703 aa23.64■■□□□ 1.38
CCDC38-201ENST00000344280 MAGEA1P43355 309 aa23.64■■□□□ 1.37
CCDC38-201ENST00000344280 POLR2FP61218 127 aaKnown RBP23.64■■□□□ 1.37
CCDC38-201ENST00000344280 FKBP1AP62942 108 aaKnown RBP23.64■■□□□ 1.37
CCDC38-201ENST00000344280 CYP4A11Q02928 519 aa23.64■■□□□ 1.37
CCDC38-201ENST00000344280 C2orf54Q08AI8 447 aa23.64■■□□□ 1.37
CCDC38-201ENST00000344280 ADAM9Q13443 819 aa23.64■■□□□ 1.37
CCDC38-201ENST00000344280 Q4G0T1 1027 aa23.64■■□□□ 1.37
CCDC38-201ENST00000344280 CREG2Q8IUH2 290 aa23.64■■□□□ 1.37
CCDC38-201ENST00000344280 PSMB7Q99436 277 aa23.64■■□□□ 1.37
CCDC38-201ENST00000344280 SNX12Q9UMY4 172 aa23.64■■□□□ 1.37
CCDC38-201ENST00000344280 JRKLQ9Y4A0 524 aa23.64■■□□□ 1.37
CCDC38-201ENST00000344280 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.64■■□□□ 1.37
CCDC38-201ENST00000344280 SPDYE3A6NKU9 549 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 PLSCR1O15162 318 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 MSH4O15457 936 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 SREBF1P36956 1147 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 RASSF7Q02833 373 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 TDRD12Q587J7 1177 aaKnown RBP23.63■■□□□ 1.37
CCDC38-201ENST00000344280 HAUS3Q68CZ6 603 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 HINFPQ9BQA5 517 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 REEP2Q9BRK0 252 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 CEP72Q9P209 647 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 TACC1O75410 805 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 BMP3P12645 472 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 HOXD13P35453 343 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 FAM193AP78312 1265 aa23.63■■□□□ 1.37
CCDC38-201ENST00000344280 CKAP4Q07065 602 aaKnown RBP23.63■■□□□ 1.37
CCDC38-201ENST00000344280 H0YIN7 160 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 NPM3O75607 178 aaKnown RBP23.62■■□□□ 1.37
CCDC38-201ENST00000344280 RPA1P27694 616 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 ECE1P42892 770 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 MARSP56192 900 aaKnown RBP23.62■■□□□ 1.37
CCDC38-201ENST00000344280 KIAA1755Q5JYT7 1200 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 NFRKBQ6P4R8 1299 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 SMARCAL1Q9NZC9 954 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 PITPNM2Q9BZ72 1349 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 RSPH10B2B2RC85 870 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 NCK2O43639 380 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 RSPH10BP0C881 870 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 CXCR5P32302 372 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 MAPK8IP2Q13387 824 aaPredicted RBP23.62■■□□□ 1.37
CCDC38-201ENST00000344280 SFR1Q86XK3 245 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 GSPT2Q8IYD1 628 aaKnown RBP23.62■■□□□ 1.37
CCDC38-201ENST00000344280 CSRNP1Q96S65 589 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 EDEM3Q9BZQ6 932 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 GBP3Q9H0R5 595 aa23.62■■□□□ 1.37
CCDC38-201ENST00000344280 BUB1O43683 1085 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 MYBL2P10244 700 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 NR2F2P24468 414 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 MMP14P50281 582 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 RBM26Q5T8P6 1007 aaKnown RBP23.61■■□□□ 1.37
CCDC38-201ENST00000344280 ZC3H3Q8IXZ2 948 aaKnown RBP23.61■■□□□ 1.37
CCDC38-201ENST00000344280 SYT2Q8N9I0 419 aaPredicted RBP23.61■■□□□ 1.37
CCDC38-201ENST00000344280 EHD2Q9NZN4 543 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 VAV3Q9UKW4 847 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 DNM3Q9UQ16 869 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 SSU72P8A0A1W2PR75 194 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 YDJCA8MPS7 323 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 EML1O00423 815 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 TUBBP07437 444 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 ARID5AQ03989 594 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 SFMBT2Q5VUG0 894 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 GDAP1L1Q96MZ0 367 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 RGL1Q9NZL6 768 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 ADAM21Q9UKJ8 722 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 PRR12Q9ULL5 1215 aa23.61■■□□□ 1.37
CCDC38-201ENST00000344280 ATRNL1Q5VV63 1379 aa23.6■■□□□ 1.37
CCDC38-201ENST00000344280 TBX3O15119 743 aa23.6■■□□□ 1.37
CCDC38-201ENST00000344280 PJA2O43164 708 aa23.6■■□□□ 1.37
CCDC38-201ENST00000344280 GNA14O95837 355 aa23.6■■□□□ 1.37
CCDC38-201ENST00000344280 MYBP10242 640 aa23.6■■□□□ 1.37
CCDC38-201ENST00000344280 TBC1D5Q92609 795 aa23.6■■□□□ 1.37
CCDC38-201ENST00000344280 RPGRIP1Q96KN7 1286 aa23.6■■□□□ 1.37
CCDC38-201ENST00000344280 PRPF6O94906 941 aaKnown RBP23.59■■□□□ 1.37
CCDC38-201ENST00000344280 POLD1P28340 1107 aa23.59■■□□□ 1.37
CCDC38-201ENST00000344280 MRPS25P82663 173 aaKnown RBP23.59■■□□□ 1.37
CCDC38-201ENST00000344280 KCNH2Q12809 1159 aa23.59■■□□□ 1.37
CCDC38-201ENST00000344280 EZH2Q15910 746 aaKnown RBP23.59■■□□□ 1.37
CCDC38-201ENST00000344280 ENOX2Q16206 610 aaKnown RBP23.59■■□□□ 1.37
CCDC38-201ENST00000344280 STYK1Q6J9G0 422 aa23.59■■□□□ 1.37
CCDC38-201ENST00000344280 OSBPL9Q96SU4 736 aa23.59■■□□□ 1.37
CCDC38-201ENST00000344280 RUSC1Q9BVN2 902 aa23.59■■□□□ 1.37
CCDC38-201ENST00000344280 BHMT2Q9H2M3 363 aa23.59■■□□□ 1.37
CCDC38-201ENST00000344280 ACTN1P12814 892 aa23.59■■□□□ 1.37
CCDC38-201ENST00000344280 SLC9C1Q4G0N8 1177 aa23.59■■□□□ 1.37
CCDC38-201ENST00000344280 ERMNQ8TAM6 284 aa23.59■■□□□ 1.37
CCDC38-201ENST00000344280 C7orf43Q8WVR3 580 aa23.59■■□□□ 1.37
CCDC38-201ENST00000344280 RBAK-RBAKDNI3L0D1 243 aa23.58■■□□□ 1.37
CCDC38-201ENST00000344280 SLC26A4O43511 780 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms