RNA–Protein interactions for RNA: ENST00000344222.5

ZNF550-202, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-202ENST00000344222 E7EVH7 732 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 FOXN1O15353 648 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 USO1O60763 962 aaKnown RBP6.85□□□□□ -1.31
ZNF550-202ENST00000344222 GSTT1P30711 240 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 GRIA2P42262 883 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 MMP13P45452 471 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 RNF187Q5TA31 235 aaPredicted RBP6.85□□□□□ -1.31
ZNF550-202ENST00000344222 CNTROBQ8N137 903 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 INPP4AQ96PE3 977 aaPredicted RBP6.85□□□□□ -1.31
ZNF550-202ENST00000344222 NACA2Q9H009 215 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 TBCCD1Q9NVR7 557 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 HOXC10Q9NYD6 342 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 THRAP3Q9Y2W1 955 aaKnown RBP6.85□□□□□ -1.31
ZNF550-202ENST00000344222 HEG1Q9ULI3 1381 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 LAMB2P55268 1798 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 TRAFD1O14545 582 aaPredicted RBP6.85□□□□□ -1.31
ZNF550-202ENST00000344222 TIMM44O43615 452 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 ACTN4O43707 911 aaKnown RBP6.85□□□□□ -1.31
ZNF550-202ENST00000344222 SERPINB7O75635 380 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 NDUFA10O95299 355 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 CALB2P22676 271 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 ERCC5P28715 1186 aaPredicted RBP6.85□□□□□ -1.31
ZNF550-202ENST00000344222 OCRLQ01968 901 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 CKAP4Q07065 602 aaKnown RBP6.85□□□□□ -1.31
ZNF550-202ENST00000344222 LONRF3Q496Y0 759 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 SPDYCQ5MJ68 293 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 KCTD16Q68DU8 428 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 C3orf67Q6ZVT6 689 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 TBC1D16Q8TBP0 767 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 CLIP3Q96DZ5 547 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 FAM227BQ96M60 508 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 TMEM237Q96Q45 408 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 CGREF1Q99674 301 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 FAM167BQ9BTA0 163 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 LACRTQ9GZZ8 138 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 HAUS4Q9H6D7 363 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 RETREG1Q9H6L5 497 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 HELLSQ9NRZ9 838 aa6.85□□□□□ -1.31
ZNF550-202ENST00000344222 AATFQ9NY61 560 aaKnown RBP eCLIP6.85□□□□□ -1.31
ZNF550-202ENST00000344222 HTR3EA5X5Y0 456 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 TMCC1O94876 653 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 MSH2P43246 934 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 SYDE2Q5VT97 1194 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 CCDC80Q76M96 950 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 CCDC63Q8NA47 563 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 CASKIN2Q8WXE0 1202 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 CHP1Q99653 195 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 HNRNPABQ99729 332 aaKnown RBP6.84□□□□□ -1.31
ZNF550-202ENST00000344222 CENPHQ9H3R5 247 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 CYP39A1Q9NYL5 469 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 BAIAP2L1Q9UHR4 511 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 CROTQ9UKG9 612 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 COMMD3-BMI1R4GMX3 469 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 CPDO75976 1380 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 PTPDC1A2A3K4 754 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 GOLGA6L4A6NEF3 574 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 IPO5O00410 1097 aaKnown RBP6.84□□□□□ -1.31
ZNF550-202ENST00000344222 ENC1O14682 589 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 BBOX1O75936 387 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 VDRP11473 427 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 CARSP49589 748 aaKnown RBP6.84□□□□□ -1.31
ZNF550-202ENST00000344222 PLCD1P51178 756 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 BIRC3Q13489 604 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 GIT2Q14161 759 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 CACNA2D3Q8IZS8 1091 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 TRIML1Q8N9V2 468 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 ATP11CQ8NB49 1132 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 DEPTORQ8TB45 409 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 RMDN2Q96LZ7 410 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 XPO6Q96QU8 1125 aaKnown RBP6.84□□□□□ -1.31
ZNF550-202ENST00000344222 ZNHIT2Q9UHR6 403 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 HPS5Q9UPZ3 1129 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 PCDHA5Q9Y5H7 936 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 ARAP2Q8WZ64 1704 aa6.84□□□□□ -1.31
ZNF550-202ENST00000344222 LRRD1A4D1F6 860 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 PPP1R3GB7ZBB8 358 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 SERPINC1P01008 464 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 ITGA2BP08514 1039 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 PABPC4LP0CB38 370 aaKnown RBP6.84□□□□□ -1.32
ZNF550-202ENST00000344222 CPA3P15088 417 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 PSMA5P28066 241 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 AKAP17AQ02040 695 aaKnown RBP6.84□□□□□ -1.32
ZNF550-202ENST00000344222 MCL1Q07820 350 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 PAK2Q13177 524 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 PHLDB3Q6NSJ2 640 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 RUFY4Q6ZNE9 571 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 TRPM8Q7Z2W7 1104 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 GBP7Q8N8V2 638 aaPredicted RBP6.84□□□□□ -1.32
ZNF550-202ENST00000344222 AGBL1Q96MI9 1066 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 TFR2Q9UP52 801 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 CEP131Q9UPN4 1083 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 SH3GLB1Q9Y371 365 aa6.84□□□□□ -1.32
ZNF550-202ENST00000344222 PORP16435 677 aaPredicted RBP6.83□□□□□ -1.32
ZNF550-202ENST00000344222 PPP2R2AP63151 447 aa6.83□□□□□ -1.32
ZNF550-202ENST00000344222 TBL3Q12788 808 aaKnown RBP6.83□□□□□ -1.32
ZNF550-202ENST00000344222 NMIQ13287 307 aaPredicted RBP6.83□□□□□ -1.32
ZNF550-202ENST00000344222 TRADDQ15628 312 aa6.83□□□□□ -1.32
ZNF550-202ENST00000344222 SLC27A3Q5K4L6 730 aa6.83□□□□□ -1.32
ZNF550-202ENST00000344222 MFSD4BQ5TF39 518 aa6.83□□□□□ -1.32
ZNF550-202ENST00000344222 DHRS4L2Q6PKH6 230 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms