RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 I3L4J1 428 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 STAM2O75886 525 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 SERPING1P05155 500 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 MYL1P05976 194 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 BMP3P12645 472 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 MAN1A1P33908 653 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 KCNJ6P48051 423 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 DHX9Q08211 1270 aaKnown RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 RAB3IL1Q8TBN0 382 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 MIPOL1Q8TD10 442 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 BPIFA3Q9BQP9 254 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 IRX2Q9BZI1 471 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 KANSL2Q9H9L4 492 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 DCP1AQ9NPI6 582 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 DAAM1Q9Y4D1 1078 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 SETBP1Q9Y6X0 1596 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 IQSEC2Q5JU85 1478 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 GOLGA8IPA6NC78 632 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 GOLGA8JA6NMD2 632 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 YARSP54577 528 aaKnown RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 IGBP1P78318 339 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 ANKRD20A3Q5VUR7 823 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 PIGOQ8TEQ8 1089 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 RIN2Q8WYP3 895 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-202ENST00000343090 BHMT2Q9H2M3 363 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 KLHL14Q9P2G3 628 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 IVNS1ABPQ9Y6Y0 642 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 PLEKHG2Q9H7P9 1386 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 PASKQ96RG2 1323 aa8.75□□□□□ -1.01
UBE4B-202ENST00000343090 ENO4A6NNW6 628 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 KIF3CO14782 793 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 PPP1R12AO14974 1030 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 MEFVO15553 781 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 STK10O94804 968 aaKnown RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 CYP19A1P11511 503 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 KRT81Q14533 505 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 TSGA10IPQ3SY00 556 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 CAPRIN2Q6IMN6 1127 aaKnown RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 DGKHQ86XP1 1220 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 ANKRD35Q8N283 1001 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 ZNF579Q8NAF0 562 aaKnown RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 GRK7Q8WTQ7 553 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 ALDH8A1Q9H2A2 487 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 CPS1P31327 1500 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 PNMA6FA0A0J9YX94 578 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 USP17L15C9J2P7 530 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 USP17L13C9JLJ4 530 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 USP17L11C9JVI0 530 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 USP17L18D6R9N7 530 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 USP17L22D6RA61 530 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 USP17L17D6RBQ6 530 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 USP17L19D6RCP7 530 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 USP17L20D6RJB6 530 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 NCK2O43639 380 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 MFAP3P55082 362 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 GFPT1Q06210 699 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 USP17L24Q0WX57 530 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 BFSP1Q12934 665 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 MYO1EQ12965 1108 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 GRAPQ13588 217 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 PSMD6Q15008 389 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 SYDE2Q5VT97 1194 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 NAIF1Q69YI7 327 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 USP17L6PQ6QN14 398 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 KRT26Q7Z3Y9 468 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 TBC1D1Q86TI0 1168 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 GRAPLQ8TC17 118 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 NT5C1BQ96P26 610 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 SENP2Q9HC62 589 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 PCDHB4Q9Y5E5 795 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 ARHGEF40Q8TER5 1519 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 EIF4E1BA6NMX2 242 aaKnown RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 LGALS16A8MUM7 142 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 E9PMD0 336 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 RANBP1P43487 201 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 TXNRD1Q16881 649 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 TTBK2Q6IQ55 1244 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 SDCCAG8Q86SQ7 713 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 SPATA24Q86W54 205 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 MCF2L2Q86YR7 1114 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 SMC1BQ8NDV3 1235 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 ANO3Q9BYT9 981 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 DNAJC17Q9NVM6 304 aaKnown RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 NOP53Q9NZM5 478 aaKnown RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 ANAPC4Q9UJX5 808 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 BCS1LQ9Y276 419 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 LRRC53A6NM62 1247 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 RAD17O75943 681 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 SASH3O75995 380 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 SESN3P58005 492 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 PPP2R5EQ16537 467 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 CYP4F22Q6NT55 531 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 STAG2Q8N3U4 1231 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 CALR3Q96L12 384 aaKnown RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 RAB3IPQ96QF0 476 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 INTS9Q9NV88 658 aaKnown RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 USP42Q9H9J4 1324 aaKnown RBP8.74□□□□□ -1.01
UBE4B-202ENST00000343090 PALMO75781 387 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 BBOX1O75936 387 aa8.74□□□□□ -1.01
UBE4B-202ENST00000343090 GAP43P17677 238 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms