RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 CSADQ9Y600 493 aa22.23■■□□□ 1.15
RTN1-202ENST00000342503 BAATQ14032 418 aaPredicted RBP22.23■■□□□ 1.15
RTN1-202ENST00000342503 EPHA7Q15375 998 aa22.23■■□□□ 1.15
RTN1-202ENST00000342503 PPFIBP1Q86W92 1011 aa22.23■■□□□ 1.15
RTN1-202ENST00000342503 CNKSR2Q8WXI2 1034 aa22.23■■□□□ 1.15
RTN1-202ENST00000342503 L3MBTL3Q96JM7 780 aaPredicted RBP22.23■■□□□ 1.15
RTN1-202ENST00000342503 CNOT6LQ96LI5 555 aaKnown RBP22.23■■□□□ 1.15
RTN1-202ENST00000342503 PURBQ96QR8 312 aaKnown RBP22.23■■□□□ 1.15
RTN1-202ENST00000342503 RMDN3Q96TC7 470 aa22.23■■□□□ 1.15
RTN1-202ENST00000342503 FGFBP2Q9BYJ0 223 aa22.23■■□□□ 1.15
RTN1-202ENST00000342503 BHMT2Q9H2M3 363 aa22.23■■□□□ 1.15
RTN1-202ENST00000342503 AGO4Q9HCK5 861 aaKnown RBP22.23■■□□□ 1.15
RTN1-202ENST00000342503 KCND1Q9NSA2 647 aa22.23■■□□□ 1.15
RTN1-202ENST00000342503 SPDYE16A6NNV3 312 aaPredicted RBP22.22■■□□□ 1.15
RTN1-202ENST00000342503 AKR1B15C9JRZ8 316 aaPredicted RBP22.22■■□□□ 1.15
RTN1-202ENST00000342503 DDX39AO00148 427 aaKnown RBP22.22■■□□□ 1.15
RTN1-202ENST00000342503 ATP2A1O14983 1001 aa22.22■■□□□ 1.15
RTN1-202ENST00000342503 MYCLP12524 364 aaPredicted RBP22.22■■□□□ 1.15
RTN1-202ENST00000342503 KCNJ6P48051 423 aa22.22■■□□□ 1.15
RTN1-202ENST00000342503 IREB2P48200 963 aaKnown RBP22.22■■□□□ 1.15
RTN1-202ENST00000342503 RBL2Q08999 1139 aa22.22■■□□□ 1.15
RTN1-202ENST00000342503 ARHGEF16Q5VV41 709 aa22.22■■□□□ 1.15
RTN1-202ENST00000342503 CEP135Q66GS9 1140 aa22.22■■□□□ 1.15
RTN1-202ENST00000342503 USP50Q70EL3 339 aaPredicted RBP22.22■■□□□ 1.15
RTN1-202ENST00000342503 TMEM139Q8IV31 216 aa22.22■■□□□ 1.15
RTN1-202ENST00000342503 CCAR2Q8N163 923 aaKnown RBP22.22■■□□□ 1.15
RTN1-202ENST00000342503 EEF2KMTQ96G04 330 aa22.22■■□□□ 1.15
RTN1-202ENST00000342503 PDCD2LQ9BRP1 358 aa22.22■■□□□ 1.15
RTN1-202ENST00000342503 HOXC10Q9NYD6 342 aa22.22■■□□□ 1.15
RTN1-202ENST00000342503 MYPNQ86TC9 1320 aa22.21■■□□□ 1.15
RTN1-202ENST00000342503 UBXN1Q04323 297 aa22.21■■□□□ 1.15
RTN1-202ENST00000342503 PIGOQ8TEQ8 1089 aa22.21■■□□□ 1.15
RTN1-202ENST00000342503 CDCA5Q96FF9 252 aa22.21■■□□□ 1.15
RTN1-202ENST00000342503 REEP2Q9BRK0 252 aa22.21■■□□□ 1.15
RTN1-202ENST00000342503 ZHX3Q9H4I2 956 aa22.21■■□□□ 1.15
RTN1-202ENST00000342503 LOC285556D6RIA3 1793 aa22.21■■□□□ 1.15
RTN1-202ENST00000342503 LOXHD1Q8IVV2 1947 aa22.21■■□□□ 1.15
RTN1-202ENST00000342503 LGALS16A8MUM7 142 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 MUTP22033 750 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 EPHX2P34913 555 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 LRRC63Q05C16 580 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 TREML2Q5T2D2 321 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 E4F1Q66K89 784 aaPredicted RBP22.2■■□□□ 1.14
RTN1-202ENST00000342503 TSG101Q99816 390 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 TUBGCP2Q9BSJ2 902 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 RUSC1Q9BVN2 902 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 TEX13BQ9BXU2 312 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 TRMT1Q9NXH9 659 aaKnown RBP22.2■■□□□ 1.14
RTN1-202ENST00000342503 DHX15O43143 795 aaKnown RBP22.2■■□□□ 1.14
RTN1-202ENST00000342503 ITGB3BPQ13352 177 aaPredicted RBP22.2■■□□□ 1.14
RTN1-202ENST00000342503 MTMR1Q13613 665 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 MB21D1Q8N884 522 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 CPLX3Q8WVH0 158 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 BAG1Q99933 345 aaPredicted RBP22.2■■□□□ 1.14
RTN1-202ENST00000342503 ELP3Q9H9T3 547 aa22.2■■□□□ 1.14
RTN1-202ENST00000342503 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.2■■□□□ 1.14
RTN1-202ENST00000342503 PRKCSHP14314 528 aaPredicted RBP22.19■■□□□ 1.14
RTN1-202ENST00000342503 MTIF2P46199 727 aaKnown RBP22.19■■□□□ 1.14
RTN1-202ENST00000342503 PLS1Q14651 629 aa22.19■■□□□ 1.14
RTN1-202ENST00000342503 RINT1Q6NUQ1 792 aa22.19■■□□□ 1.14
RTN1-202ENST00000342503 FOXR2Q6PJQ5 311 aa22.19■■□□□ 1.14
RTN1-202ENST00000342503 MIER3Q7Z3K6 550 aa22.19■■□□□ 1.14
RTN1-202ENST00000342503 ZNF507Q8TCN5 953 aa22.19■■□□□ 1.14
RTN1-202ENST00000342503 C16orf45Q96MC5 204 aaPredicted RBP22.19■■□□□ 1.14
RTN1-202ENST00000342503 WRAP73Q9P2S5 460 aaPredicted RBP22.19■■□□□ 1.14
RTN1-202ENST00000342503 ZBTB39O15060 712 aa22.18■■□□□ 1.14
RTN1-202ENST00000342503 FGFR1OPO95684 399 aaKnown RBP22.18■■□□□ 1.14
RTN1-202ENST00000342503 GYPCP04921 128 aa22.18■■□□□ 1.14
RTN1-202ENST00000342503 ZC3H15Q8WU90 426 aaKnown RBP22.18■■□□□ 1.14
RTN1-202ENST00000342503 SCFD1Q8WVM8 642 aa22.18■■□□□ 1.14
RTN1-202ENST00000342503 NACC1Q96RE7 527 aa22.18■■□□□ 1.14
RTN1-202ENST00000342503 ACAD9Q9H845 621 aa22.18■■□□□ 1.14
RTN1-202ENST00000342503 A0A0G2JMZ2 1700 aa22.18■■□□□ 1.14
RTN1-202ENST00000342503 LCTP09848 1927 aa22.18■■□□□ 1.14
RTN1-202ENST00000342503 RSPH10B2B2RC85 870 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 B4DLN1 442 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 PES1O00541 588 aaKnown RBP22.17■■□□□ 1.14
RTN1-202ENST00000342503 MFAP3LO75121 409 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 TPM2P07951 284 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 RSPH10BP0C881 870 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 CASP14P31944 242 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 NF2P35240 595 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 ZCWPW2Q504Y3 356 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 MOB2Q70IA6 237 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 SFR1Q86XK3 245 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 NELFCDQ8IXH7 590 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 BANK1Q8NDB2 785 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 NEK9Q8TD19 979 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 PANX2Q96RD6 677 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 LXNQ9BS40 222 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 ARHGAP6O43182 974 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 STX10O60499 249 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 KIF20AO95235 890 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 CCND2P30279 289 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 DNM2P50570 870 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 PPATQ06203 517 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 XRRA1Q6P2D8 792 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 GADL1Q6ZQY3 521 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 LRRC55Q6ZSA7 311 aa22.17■■□□□ 1.14
RTN1-202ENST00000342503 CLMNQ96JQ2 1002 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms