RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 ERLIN1O75477 346 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 RPA1P27694 616 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 GIT2Q14161 759 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 CCDC40Q4G0X9 1142 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 SLC30A10Q6XR72 485 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 SUPT20HQ8NEM7 779 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 ZBTB9Q96C00 473 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 PURBQ96QR8 312 aaKnown RBP22.23■■□□□ 1.15
SPG7-202ENST00000341316 ADAM21Q9UKJ8 722 aa22.23■■□□□ 1.15
SPG7-202ENST00000341316 KRT18P05783 430 aaKnown RBP22.22■■□□□ 1.15
SPG7-202ENST00000341316 EIF4A3P38919 411 aaKnown RBP22.22■■□□□ 1.15
SPG7-202ENST00000341316 VAV2P52735 878 aa22.22■■□□□ 1.15
SPG7-202ENST00000341316 VSNL1P62760 191 aa22.22■■□□□ 1.15
SPG7-202ENST00000341316 MCTP2Q6DN12 878 aa22.22■■□□□ 1.15
SPG7-202ENST00000341316 RSBN1LQ6PCB5 846 aaPredicted RBP22.22■■□□□ 1.15
SPG7-202ENST00000341316 BCAS3Q9H6U6 928 aa22.22■■□□□ 1.15
SPG7-202ENST00000341316 HERC5Q9UII4 1024 aaKnown RBP22.22■■□□□ 1.15
SPG7-202ENST00000341316 ZBTB12Q9Y330 459 aaPredicted RBP22.22■■□□□ 1.15
SPG7-202ENST00000341316 SMCHD1A6NHR9 2005 aa22.22■■□□□ 1.15
SPG7-202ENST00000341316 MACROD2A1Z1Q3 448 aa22.22■■□□□ 1.15
SPG7-202ENST00000341316 IPO7O95373 1038 aaKnown RBP22.22■■□□□ 1.15
SPG7-202ENST00000341316 RXRBP28702 533 aa22.22■■□□□ 1.15
SPG7-202ENST00000341316 TUBB4BP68371 445 aa22.22■■□□□ 1.15
SPG7-202ENST00000341316 CYP4A11Q02928 519 aa22.22■■□□□ 1.15
SPG7-202ENST00000341316 ZNF70Q9UC06 446 aaPredicted RBP22.22■■□□□ 1.15
SPG7-202ENST00000341316 L1RE1Q9UN81 338 aa22.22■■□□□ 1.15
SPG7-202ENST00000341316 PITPNM2Q9BZ72 1349 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 CNTNAP1P78357 1384 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 EML1O00423 815 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 STAT2P52630 851 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 KIF11P52732 1056 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 IRX5P78411 483 aaPredicted RBP22.21■■□□□ 1.15
SPG7-202ENST00000341316 APBA1Q02410 837 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 FAM83BQ5T0W9 1011 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 PAPD7Q5XG87 772 aaKnown RBP22.21■■□□□ 1.15
SPG7-202ENST00000341316 SYT2Q8N9I0 419 aaPredicted RBP22.21■■□□□ 1.15
SPG7-202ENST00000341316 EXOC4Q96A65 974 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 FAM20AQ96MK3 541 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 CEP63Q96MT8 703 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 GMLQ99445 158 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 REEP2Q9BRK0 252 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 COL4A5P29400 1685 aa22.21■■□□□ 1.15
SPG7-202ENST00000341316 PIK3CDO00329 1044 aa22.2■■□□□ 1.15
SPG7-202ENST00000341316 NOL4O94818 638 aa22.2■■□□□ 1.15
SPG7-202ENST00000341316 TRIM59Q8IWR1 403 aa22.2■■□□□ 1.15
SPG7-202ENST00000341316 ERMNQ8TAM6 284 aa22.2■■□□□ 1.15
SPG7-202ENST00000341316 POLD4Q9HCU8 107 aa22.2■■□□□ 1.15
SPG7-202ENST00000341316 DNM3Q9UQ16 869 aa22.2■■□□□ 1.15
SPG7-202ENST00000341316 TMX2Q9Y320 296 aa22.2■■□□□ 1.15
SPG7-202ENST00000341316 IGLV3-22A0A075B6J6 115 aa22.2■■□□□ 1.14
SPG7-202ENST00000341316 CYP3A4P08684 503 aa22.2■■□□□ 1.14
SPG7-202ENST00000341316 HOXD13P35453 343 aa22.2■■□□□ 1.14
SPG7-202ENST00000341316 PDXDC1Q6P996 788 aa22.2■■□□□ 1.14
SPG7-202ENST00000341316 TRERF1Q96PN7 1200 aa22.2■■□□□ 1.14
SPG7-202ENST00000341316 TMOD2Q9NZR1 351 aa22.2■■□□□ 1.14
SPG7-202ENST00000341316 PCDHA13Q9Y5I0 950 aa22.2■■□□□ 1.14
SPG7-202ENST00000341316 LMAN1P49257 510 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 SPA17Q15506 151 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 ZC3H3Q8IXZ2 948 aaKnown RBP22.19■■□□□ 1.14
SPG7-202ENST00000341316 FAM151AQ8WW52 585 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 MMS19Q96T76 1030 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 WDR18Q9BV38 432 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 ARHGEF10LQ9HCE6 1279 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 NLRC4Q9NPP4 1024 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 RGL1Q9NZL6 768 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 VPS18Q9P253 973 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 SAR1BQ9Y6B6 198 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 RSPH10B2B2RC85 870 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 RSPH10BP0C881 870 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 MARSP56192 900 aaKnown RBP22.19■■□□□ 1.14
SPG7-202ENST00000341316 KIF5AQ12840 1032 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 MUM1L1Q5H9M0 696 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 CCDC174Q6PII3 467 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 SFR1Q86XK3 245 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 EHBP1Q8NDI1 1231 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 CRACR2AQ9BSW2 395 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 IFIH1Q9BYX4 1025 aaKnown RBP22.19■■□□□ 1.14
SPG7-202ENST00000341316 ZNF277Q9NRM2 450 aaPredicted RBP22.19■■□□□ 1.14
SPG7-202ENST00000341316 ZBTB21Q9ULJ3 1066 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 SYNPO2Q9UMS6 1093 aa22.19■■□□□ 1.14
SPG7-202ENST00000341316 TULP2O00295 520 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 N4BP1O75113 896 aaKnown RBP22.18■■□□□ 1.14
SPG7-202ENST00000341316 LCA5LO95447 670 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 CFBP00751 764 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 VIL1P09327 827 aaKnown RBP22.18■■□□□ 1.14
SPG7-202ENST00000341316 ZNF76P36508 570 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 ADAM9Q13443 819 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 DLGAP5Q15398 846 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 ASTE1Q2TB18 679 aaPredicted RBP22.18■■□□□ 1.14
SPG7-202ENST00000341316 HGSNATQ68CP4 663 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 EIF2AK1Q9BQI3 630 aaKnown RBP22.18■■□□□ 1.14
SPG7-202ENST00000341316 PSD3Q9NYI0 1048 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 ZYXQ15942 572 aaKnown RBP22.18■■□□□ 1.14
SPG7-202ENST00000341316 CACNA2D4Q7Z3S7 1137 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 CAMKK2Q96RR4 588 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 RUSC1Q9BVN2 902 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 BHMT2Q9H2M3 363 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 MLXIPQ9HAP2 919 aa22.18■■□□□ 1.14
SPG7-202ENST00000341316 TLR2O60603 784 aa22.17■■□□□ 1.14
SPG7-202ENST00000341316 EIF3JO75822 258 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms