RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 SMCHD1A6NHR9 2005 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 TLR2O60603 784 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 MED24O75448 989 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 SERPING1P05155 500 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 CERKLQ49MI3 558 aaPredicted RBP16.06■□□□□ 0.16
TDP2-201ENST00000341060 SFMBT2Q5VUG0 894 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 CCNI2Q6ZMN8 369 aaPredicted RBP16.06■□□□□ 0.16
TDP2-201ENST00000341060 NELFCDQ8IXH7 590 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 ETNPPLQ8TBG4 499 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 DRC1Q96MC2 740 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 NLRC4Q9NPP4 1024 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 SRCAPQ6ZRS2 3230 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 ZC3H4Q9UPT8 1303 aaKnown RBP16.06■□□□□ 0.16
TDP2-201ENST00000341060 NPHP3-ACAD11A0A0J9YXS1 232 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 G3V3G9 751 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 TBX3O15119 743 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 MYBL2P10244 700 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 TNNT3P45378 269 aaPredicted RBP16.06■□□□□ 0.16
TDP2-201ENST00000341060 CACNB1Q02641 598 aaPredicted RBP16.06■□□□□ 0.16
TDP2-201ENST00000341060 ARSHQ5FYA8 562 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 DCAF8Q5TAQ9 597 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 SLFN13Q68D06 897 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 MCTP2Q6DN12 878 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 PODNQ7Z5L7 613 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 MRIQ9BWK5 157 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 PI4KBQ9UBF8 816 aa16.06■□□□□ 0.16
TDP2-201ENST00000341060 POTEFA5A3E0 1075 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 DDTLA6NHG4 134 aaPredicted RBP16.05■□□□□ 0.16
TDP2-201ENST00000341060 FAM196BA6NMK8 535 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 RAD21O60216 631 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 ZMYND10O75800 440 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 POTEIP0CG38 1075 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 ARHGAP4P98171 946 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 RASSF7Q02833 373 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 SHROOM1Q2M3G4 852 aaPredicted RBP16.05■□□□□ 0.16
TDP2-201ENST00000341060 NFRKBQ6P4R8 1299 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 POTEGQ6S5H5 508 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 POTEEQ6S8J3 1075 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 SPATA4Q8NEY3 305 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 NOX5Q96PH1 765 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 UIMC1Q96RL1 719 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 SELENOOQ9BVL4 669 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 LSM14BQ9BX40 385 aaKnown RBP16.05■□□□□ 0.16
TDP2-201ENST00000341060 IDI2Q9BXS1 227 aa16.05■□□□□ 0.16
TDP2-201ENST00000341060 SYF2O95926 243 aaKnown RBP16.04■□□□□ 0.16
TDP2-201ENST00000341060 STAT3P40763 770 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 POLR2FP61218 127 aaKnown RBP16.04■□□□□ 0.16
TDP2-201ENST00000341060 TCP10Q12799 353 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 ZSCAN26Q16670 478 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 Q4G0T1 1027 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 GPIHBP1Q8IV16 184 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 GOLGA5Q8TBA6 731 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 AMNQ9BXJ7 453 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 TLR10Q9BXR5 811 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 TSKSQ9UJT2 592 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 RBBP6Q7Z6E9 1792 aaKnown RBP16.04■□□□□ 0.16
TDP2-201ENST00000341060 PHACTR2O75167 634 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 KRT18P05783 430 aaKnown RBP16.04■□□□□ 0.16
TDP2-201ENST00000341060 CACNB3P54284 484 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 RAD51AP2Q09MP3 1159 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 ADAM9Q13443 819 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 KLHDC7AQ5VTJ3 777 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 CATSPER3Q86XQ3 398 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 SIAH1Q8IUQ4 282 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 AENQ8WTP8 325 aaKnown RBP16.04■□□□□ 0.16
TDP2-201ENST00000341060 ZBTB9Q96C00 473 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 P2RX7Q99572 595 aaKnown RBP16.04■□□□□ 0.16
TDP2-201ENST00000341060 TMX4Q9H1E5 349 aaPredicted RBP16.04■□□□□ 0.16
TDP2-201ENST00000341060 LUC7LQ9NQ29 371 aaKnown RBP16.04■□□□□ 0.16
TDP2-201ENST00000341060 FAM198AQ9UFP1 575 aa16.04■□□□□ 0.16
TDP2-201ENST00000341060 RNF40O75150 1001 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 PRPF6O94906 941 aaKnown RBP16.03■□□□□ 0.16
TDP2-201ENST00000341060 RPA1P27694 616 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 ACTN2P35609 894 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 PDE6BP35913 854 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 FKBP1AP62942 108 aaKnown RBP16.03■□□□□ 0.16
TDP2-201ENST00000341060 ICA1Q05084 483 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 PRR16Q569H4 304 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 TMEM179Q6ZVK1 233 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 GSPT2Q8IYD1 628 aaKnown RBP16.03■□□□□ 0.16
TDP2-201ENST00000341060 ANKRD13CQ8N6S4 541 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 GMCL1P1Q8NEA9 526 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 ERMNQ8TAM6 284 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 LENG9Q96B70 501 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 DBNDD1Q9H9R9 158 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 CETN3O15182 167 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
TDP2-201ENST00000341060 NR2F2P24468 414 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 CXCR5P32302 372 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 EPS15P42566 896 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 HDLBPQ00341 1268 aaKnown RBP16.03■□□□□ 0.16
TDP2-201ENST00000341060 GIT2Q14161 759 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 SLC18A3Q16572 532 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 CCDC181Q5TID7 509 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 SH3BP5LQ7L8J4 393 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 KIAA0825Q8IV33 1275 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 MASTLQ96GX5 879 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 CRACR2AQ9BSW2 395 aa16.03■□□□□ 0.16
TDP2-201ENST00000341060 LRRC1Q9BTT6 524 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms