RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 CDK8P49336 464 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 MNAT1P51948 309 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 ERVK-9P63128 1117 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 SATB1Q01826 763 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 COASYQ13057 564 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 RNF187Q5TA31 235 aaPredicted RBP13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 MMS22LQ6ZRQ5 1243 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 ZNF572Q7Z3I7 529 aaPredicted RBP13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 AK8Q96MA6 479 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 MTMR9Q96QG7 549 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 SEC63Q9UGP8 760 aaKnown RBP13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 ATP2C2O75185 946 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 CPP00450 1065 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 TAL1P17542 331 aaPredicted RBP13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 NR1D1P20393 614 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 RXRBP28702 533 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 AMPD3Q01432 767 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 SFMBT2Q5VUG0 894 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 RAD54LQ92698 747 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 CAVIN3Q969G5 261 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 DDX47Q9H0S4 455 aaKnown RBP13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 GDF3Q9NR23 364 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 SNED1Q8TER0 1413 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 LAD1O00515 517 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 RAD21O60216 631 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 ITGA4P13612 1032 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 COPB2P35606 906 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 STAT3P40763 770 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 CASP5P51878 434 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 SWT1Q5T5J6 900 aaKnown RBP13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 MCTP2Q6DN12 878 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 HOMEZQ8IX15 550 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 GUF1Q8N442 669 aaKnown RBP13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 CUEDC2Q9H467 287 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 TNRC6CQ9HCJ0 1690 aaKnown RBP13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 RGPD3A6NKT7 1758 aaPredicted RBP13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 LAMB1P07942 1786 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 RGPD4Q7Z3J3 1758 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 E7EVH7 732 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 SLC9A1P19634 815 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 IFT88Q13099 833 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 TTBK2Q6IQ55 1244 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 GJB7Q6PEY0 223 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 SLC30A10Q6XR72 485 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 ADAT2Q7Z6V5 191 aaKnown RBP13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 INPP4AQ96PE3 977 aaPredicted RBP13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 CD248Q9HCU0 757 aa13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 AJAP1Q9UKB5 411 aaPredicted RBP13.14□□□□□ -0.31
CCDC144CP-201ENST00000340196 H0YHG0 523 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 PJA2O43164 708 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 PRLRP16471 622 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 BTDP43251 543 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 GNAQP50148 359 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 PICALMQ13492 652 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 SLC9C1Q4G0N8 1177 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 CCDC84Q86UT8 332 aaPredicted RBP13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 SUGP1Q8IWZ8 645 aaKnown RBP13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 IFT20Q8IY31 132 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 DNAJC19Q96DA6 116 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 CELF4Q9BZC1 486 aaKnown RBP13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 TRIM31Q9BZY9 425 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 COL4A3BPQ9Y5P4 624 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 POTEB3A0JP26 581 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 CCDC189A1A4V9 331 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 POTECB2RU33 542 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 PPP1R11O60927 126 aaPredicted RBP13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 ECHS1P30084 290 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 SKOR1P84550 965 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 KLHL30Q0D2K2 578 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 UAP1Q16222 522 aaPredicted RBP13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 MYOCDQ8IZQ8 938 aa13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 ZNF473Q8WTR7 871 aaKnown RBP13.13□□□□□ -0.31
CCDC144CP-201ENST00000340196 CEP104O60308 925 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 GNA11P29992 359 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 MAP2K2P36507 400 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 PTK2Q05397 1052 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 QPCTQ16769 361 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 ALS2CLQ60I27 953 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 HAS1Q92839 578 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 PANK4Q9NVE7 773 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 BCS1LQ9Y276 419 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 ATP6V0A2Q9Y487 856 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 MEIS1O00470 390 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 EPB41P11171 864 aaKnown RBP13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 ITIH3Q06033 890 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 PAK2Q13177 524 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 NAB2Q15742 525 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 ZCWPW2Q504Y3 356 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 MEI1Q5TIA1 1274 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 OTUD6BQ8N6M0 293 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 CCT8L2Q96SF2 557 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 SPZ1Q9BXG8 430 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 TNS1Q9HBL0 1735 aaKnown RBP13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 RGS17Q9UGC6 210 aaPredicted RBP13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 KIAA1024Q9UPX6 916 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 PPP1R37O75864 691 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 PTGISQ16647 500 aa13.12□□□□□ -0.31
CCDC144CP-201ENST00000340196 SHROOM1Q2M3G4 852 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms