RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 GBF1Q92538 1859 aa16.65■□□□□ 0.26
ERCC1-203ENST00000340192 C17orf102A2RUQ5 167 aa16.64■□□□□ 0.25
ERCC1-203ENST00000340192 CDKL5O76039 1030 aa16.64■□□□□ 0.25
ERCC1-203ENST00000340192 CKBP12277 381 aa16.64■□□□□ 0.25
ERCC1-203ENST00000340192 HOXC8P31273 242 aa16.64■□□□□ 0.25
ERCC1-203ENST00000340192 RFC2P35250 354 aa16.64■□□□□ 0.25
ERCC1-203ENST00000340192 RBL2Q08999 1139 aa16.64■□□□□ 0.25
ERCC1-203ENST00000340192 ITGB3BPQ13352 177 aaPredicted RBP16.64■□□□□ 0.25
ERCC1-203ENST00000340192 FAM109BQ6ICB4 259 aaPredicted RBP16.64■□□□□ 0.25
ERCC1-203ENST00000340192 WNT8BQ93098 351 aa16.64■□□□□ 0.25
ERCC1-203ENST00000340192 SDF4Q9BRK5 362 aa16.64■□□□□ 0.25
ERCC1-203ENST00000340192 RNPEPQ9H4A4 650 aa16.64■□□□□ 0.25
ERCC1-203ENST00000340192 CXXC1Q9P0U4 656 aaPredicted RBP16.64■□□□□ 0.25
ERCC1-203ENST00000340192 SLC9A2Q9UBY0 812 aa16.64■□□□□ 0.25
ERCC1-203ENST00000340192 NFASCO94856 1347 aa16.64■□□□□ 0.25
ERCC1-203ENST00000340192 IGLV3-22A0A075B6J6 115 aa16.63■□□□□ 0.25
ERCC1-203ENST00000340192 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.63■□□□□ 0.25
ERCC1-203ENST00000340192 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.63■□□□□ 0.25
ERCC1-203ENST00000340192 PFKMP08237 780 aa16.63■□□□□ 0.25
ERCC1-203ENST00000340192 SELPP16109 830 aa16.63■□□□□ 0.25
ERCC1-203ENST00000340192 SERINC5Q86VE9 423 aa16.63■□□□□ 0.25
ERCC1-203ENST00000340192 PLA2G4DQ86XP0 818 aa16.63■□□□□ 0.25
ERCC1-203ENST00000340192 ATP6V0A1Q93050 837 aa16.63■□□□□ 0.25
ERCC1-203ENST00000340192 MTIF3Q9H2K0 278 aaKnown RBP16.63■□□□□ 0.25
ERCC1-203ENST00000340192 SETD4Q9NVD3 440 aa16.63■□□□□ 0.25
ERCC1-203ENST00000340192 PCDHA4Q9UN74 947 aa16.63■□□□□ 0.25
ERCC1-203ENST00000340192 TREHO43280 583 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 DTNBO60941 627 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 LARGE1O95461 756 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 CTDNEP1O95476 244 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 ACTR2P61160 394 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 ME3Q16798 604 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 TRIM71Q2Q1W2 868 aaKnown RBP16.62■□□□□ 0.25
ERCC1-203ENST00000340192 LRRC8DQ7L1W4 858 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 NECAB1Q8N987 351 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 TET1Q8NFU7 2136 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 GLG1Q92896 1179 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 UIMC1Q96RL1 719 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 MTMR10Q9NXD2 777 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 ERAP1Q9NZ08 941 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 EMSYQ7Z589 1322 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 STK36Q9NRP7 1315 aa16.62■□□□□ 0.25
ERCC1-203ENST00000340192 GRXCR1A8MXD5 290 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 IPO5O00410 1097 aaKnown RBP16.61■□□□□ 0.25
ERCC1-203ENST00000340192 GNAT1P11488 350 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 MARK3P27448 753 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 SETQ01105 290 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-203ENST00000340192 GPNMBQ14956 572 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 ZNF618Q5T7W0 954 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 ZNF697Q5TEC3 545 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 BLIDQ8IZY5 108 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 FAM177A1Q8N128 213 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-203ENST00000340192 LMBR1Q8WVP7 490 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 GTF3C6Q969F1 213 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 FAM161BQ96MY7 647 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 PCYT2Q99447 389 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.25
ERCC1-203ENST00000340192 SMARCAD1Q9H4L7 1026 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 EYSQ5T1H1 3165 aa16.61■□□□□ 0.25
ERCC1-203ENST00000340192 CHD9Q3L8U1 2897 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 ZBBXA8MT70 800 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 M0R2N6 131 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 DDX39AO00148 427 aaKnown RBP16.6■□□□□ 0.25
ERCC1-203ENST00000340192 DHX15O43143 795 aaKnown RBP16.6■□□□□ 0.25
ERCC1-203ENST00000340192 LGR5O75473 907 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 CCNE2O96020 404 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 ACTN1P12814 892 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 DNAJB2P25686 324 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 CIITAP33076 1130 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 THPOP40225 353 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 NPY5RQ15761 445 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 PRR16Q569H4 304 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 GALNT17Q6IS24 598 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 TRAF7Q6Q0C0 670 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 DAGLBQ8NCG7 672 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 TBCKQ8TEA7 893 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 ZNF577Q9BSK1 485 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 AZI2Q9H6S1 392 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 KCNJ14Q9UNX9 436 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 SLC4A7Q9Y6M7 1214 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 NRCAMQ92823 1304 aa16.6■□□□□ 0.25
ERCC1-203ENST00000340192 WDR81Q562E7 1941 aa16.59■□□□□ 0.25
ERCC1-203ENST00000340192 EDIL3O43854 480 aa16.59■□□□□ 0.25
ERCC1-203ENST00000340192 NBNO60934 754 aa16.59■□□□□ 0.25
ERCC1-203ENST00000340192 ATG7O95352 703 aa16.59■□□□□ 0.25
ERCC1-203ENST00000340192 PARNO95453 639 aaKnown RBP16.59■□□□□ 0.25
ERCC1-203ENST00000340192 PBX2P40425 430 aa16.59■□□□□ 0.25
ERCC1-203ENST00000340192 USP11P51784 963 aa16.59■□□□□ 0.25
ERCC1-203ENST00000340192 ADAM17P78536 824 aa16.59■□□□□ 0.25
ERCC1-203ENST00000340192 PPFIA1Q13136 1202 aa16.59■□□□□ 0.25
ERCC1-203ENST00000340192 LENG9Q96B70 501 aa16.59■□□□□ 0.25
ERCC1-203ENST00000340192 PHF20Q9BVI0 1012 aa16.59■□□□□ 0.25
ERCC1-203ENST00000340192 TTYH1Q9H313 450 aaPredicted RBP16.59■□□□□ 0.25
ERCC1-203ENST00000340192 SEMA6BQ9H3T3 888 aa16.59■□□□□ 0.25
ERCC1-203ENST00000340192 ORC3Q9UBD5 711 aaPredicted RBP16.59■□□□□ 0.25
ERCC1-203ENST00000340192 PTPRSQ13332 1948 aa16.58■□□□□ 0.25
ERCC1-203ENST00000340192 CXCL10P02778 98 aa16.58■□□□□ 0.24
ERCC1-203ENST00000340192 XBP1P17861 261 aa16.58■□□□□ 0.24
ERCC1-203ENST00000340192 STAT5BP51692 787 aa16.58■□□□□ 0.24
ERCC1-203ENST00000340192 MBTPS1Q14703 1052 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms