RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PIGOQ8TEQ8 1089 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 ATXN2LQ8WWM7 1075 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 GPATCH3Q96I76 525 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 ZNF333Q96JL9 665 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 TAOK3Q9H2K8 898 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 NHEJ1Q9H9Q4 299 aaPredicted RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 RABL2AQ9UBK7 228 aaPredicted RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 LUC7L2Q9Y383 392 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 HTR3EA5X5Y0 456 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 SART1O43290 800 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 GSTT2P0CG29 244 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 GSTT2BP0CG30 244 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 RASA1P20936 1047 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 LTKP29376 864 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 ZNF280DQ6N043 979 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 CCDC65Q8IXS2 484 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 STAG2Q8N3U4 1231 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 OGFOD1Q8N543 542 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 MREGQ8N565 214 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 GBP7Q8N8V2 638 aaPredicted RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 FAM13CQ8NE31 585 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 DEPTORQ8TB45 409 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 KLHDC4Q8TBB5 520 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 NRG4Q8WWG1 115 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 HSPBAP1Q96EW2 488 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 TUBGCP5Q96RT8 1024 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 DDX21Q9NR30 783 aaKnown RBP eCLIP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 FAM114A2Q9NRY5 505 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 RASAL2Q9UJF2 1139 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 NUB1Q9Y5A7 615 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 KIAA1210Q9ULL0 1709 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 GOLGA8BA8MQT2 603 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 FTCDO95954 541 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 ANXA1P04083 346 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 ZFXP17010 805 aaPredicted RBP10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 TARSP26639 723 aaKnown RBP10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 TNFRSF8P28908 595 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 ECHS1P30084 290 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 MTTPP55157 894 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 RHBDL3P58872 404 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 IFI35P80217 286 aaPredicted RBP10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 TTF1Q15361 905 aaPredicted RBP10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 SPATA24Q86W54 205 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 TTC30AQ86WT1 665 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 WDR75Q8IWA0 830 aaKnown RBP10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 SDR16C5Q8N3Y7 309 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 DHTKD1Q96HY7 919 aaPredicted RBP10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 TIPINQ9BVW5 301 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 CLIC5Q9NZA1 410 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 EPHB2P29323 1055 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 SLCO1A2P46721 670 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 HAND2P61296 217 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 CCDC6Q16204 474 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 TSR1Q2NL82 804 aaKnown RBP10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 GALNTL6Q49A17 601 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 KCTD21Q4G0X4 260 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 GRAMD4Q6IC98 578 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 ASRGL1Q7L266 308 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 CACNA2D4Q7Z3S7 1137 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 ANKLE1Q8NAG6 615 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 SCG3Q8WXD2 468 aaKnown RBP10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 HAUS1Q96CS2 278 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 PBKQ96KB5 322 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 SPATA17Q96L03 361 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 CEP295NLQ96MC4 621 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 TRIM31Q9BZY9 425 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 BLZF1Q9H2G9 400 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 TIMM22Q9Y584 194 aa10.5□□□□□ -0.73
PTCHD4-201ENST00000339488 TMEM2Q9UHN6 1383 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 FOXO6A8MYZ6 492 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 SNX3O60493 162 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 RXRGP48443 463 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 HSPA2P54652 639 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 ADARP55265 1226 aaKnown RBP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 KRT83P78385 493 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 CYP4A11Q02928 519 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 THOC7Q6I9Y2 204 aaKnown RBP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 ZNF449Q6P9G9 518 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 KBTBD2Q8IY47 623 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 CEP70Q8NHQ1 597 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 PHKBQ93100 1093 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 DUSP9Q99956 384 aaKnown RBP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 CWC25Q9NXE8 425 aaPredicted RBP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 CTNNAL1Q9UBT7 734 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 CRYBG1Q9Y4K1 1723 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 MYH2Q9UKX2 1941 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 JCADQ9P266 1359 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 USP42Q9H9J4 1324 aaKnown RBP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 MYH7BA7E2Y1 1941 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 ZNF142P52746 1687 aaPredicted RBP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 CPLX1O14810 134 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 ASAP2O43150 1006 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 ATP9BO43861 1147 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 BAG3O95817 575 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 TUFMP49411 452 aaKnown RBP10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 BIRC3Q13489 604 aa10.49□□□□□ -0.73
PTCHD4-201ENST00000339488 VWA3BQ502W6 1294 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms