RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 DNAAF2Q9NVR5 837 aaKnown RBP10.13□□□□□ -0.79
RPGR-202ENST00000339363 SLC5A4Q9NY91 659 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 SLC4A4Q9Y6R1 1079 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 SPEF2Q9C093 1822 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 BIRC3Q13489 604 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 SEC23AQ15436 765 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 TRADDQ15628 312 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 CDC37Q16543 378 aaPredicted RBP10.13□□□□□ -0.79
RPGR-202ENST00000339363 PDXDC2PQ6P474 469 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 KSR1Q8IVT5 923 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 PPFIBP2Q8ND30 876 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 CCT6BQ92526 530 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 TNFRSF25Q93038 417 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 CAVIN3Q969G5 261 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 NOX5Q96PH1 765 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 XPO6Q96QU8 1125 aaKnown RBP10.13□□□□□ -0.79
RPGR-202ENST00000339363 KCNK9Q9NPC2 374 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 LUC7LQ9NQ29 371 aaKnown RBP10.13□□□□□ -0.79
RPGR-202ENST00000339363 FAM114A2Q9NRY5 505 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 BCL9LQ86UU0 1499 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 MYH2Q9UKX2 1941 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 MCM7P33993 719 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 LIFRP42702 1097 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 MSH2P43246 934 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 CTSWP56202 376 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 NCAPG2Q86XI2 1143 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 PLEKHG4BQ96PX9 1271 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 CPVLQ9H3G5 476 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 TMBIM4Q9HC24 238 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 SALL4Q9UJQ4 1053 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 ZBTB1Q9Y2K1 713 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 TNKSO95271 1327 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 STK36Q9NRP7 1315 aa10.13□□□□□ -0.79
RPGR-202ENST00000339363 IRS4O14654 1257 aaPredicted RBP10.12□□□□□ -0.79
RPGR-202ENST00000339363 SUN1O94901 812 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 FTCDO95954 541 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 ARID5AQ03989 594 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 RCN2Q14257 317 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 UBE3CQ15386 1083 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 SLC35G1Q2M3R5 365 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 MFSD6Q6ZSS7 791 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 DNAAF5Q86Y56 855 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 IQCKQ8N0W5 287 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 ZCRB1Q8TBF4 217 aaKnown RBP10.12□□□□□ -0.79
RPGR-202ENST00000339363 RAB3IPQ96QF0 476 aaPredicted RBP10.12□□□□□ -0.79
RPGR-202ENST00000339363 ETNK1Q9HBU6 452 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 ATP8A1Q9Y2Q0 1164 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 TAF1P21675 1872 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.12□□□□□ -0.79
RPGR-202ENST00000339363 CEP104O60308 925 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 FGFR2P21802 821 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 KLRK1P26718 216 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 RASSF7Q02833 373 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 DHX9Q08211 1270 aaKnown RBP10.12□□□□□ -0.79
RPGR-202ENST00000339363 EHHADHQ08426 723 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 PRPF4BQ13523 1007 aaKnown RBP10.12□□□□□ -0.79
RPGR-202ENST00000339363 WTAPQ15007 396 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 Q4G0T1 1027 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 NAALADL2Q58DX5 795 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 FAM47AQ5JRC9 791 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 C1QTNF12Q5T7M4 302 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 DDX42Q86XP3 938 aaKnown RBP eCLIP10.12□□□□□ -0.79
RPGR-202ENST00000339363 CREG2Q8IUH2 290 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 ARHGEF2Q92974 986 aaKnown RBP10.12□□□□□ -0.79
RPGR-202ENST00000339363 TMEM87BQ96K49 555 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 NUDCD1Q96RS6 583 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 PAGR1Q9BTK6 254 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 FOXP1Q9H334 677 aaPredicted RBP10.12□□□□□ -0.79
RPGR-202ENST00000339363 PNMA2Q9UL42 364 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 ATRNO75882 1429 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 BAZ2AQ9UIF9 1905 aaKnown RBP10.12□□□□□ -0.79
RPGR-202ENST00000339363 RGS16O15492 202 aaPredicted RBP10.12□□□□□ -0.79
RPGR-202ENST00000339363 MTMR3Q13615 1198 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 HOOK3Q86VS8 718 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 LRRC34Q8IZ02 419 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 SRBD1Q8N5C6 995 aaKnown RBP10.12□□□□□ -0.79
RPGR-202ENST00000339363 ANKRD42Q8N9B4 389 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 PHF20Q9BVI0 1012 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 ABCF3Q9NUQ8 709 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 FBXL5Q9UKA1 691 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 BLOC1S6Q9UL45 172 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 CHMP2BQ9UQN3 213 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 CAPN6Q9Y6Q1 641 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 WDR19Q8NEZ3 1342 aa10.12□□□□□ -0.79
RPGR-202ENST00000339363 FAM200BP0CF97 657 aa10.11□□□□□ -0.79
RPGR-202ENST00000339363 CYP2D6P10635 497 aa10.11□□□□□ -0.79
RPGR-202ENST00000339363 CHN1P15882 459 aa10.11□□□□□ -0.79
RPGR-202ENST00000339363 HSD17B3P37058 310 aa10.11□□□□□ -0.79
RPGR-202ENST00000339363 LACTB2Q53H82 288 aaPredicted RBP10.11□□□□□ -0.79
RPGR-202ENST00000339363 TCP11X2Q5H9J9 407 aa10.11□□□□□ -0.79
RPGR-202ENST00000339363 SH2D4BQ5SQS7 431 aa10.11□□□□□ -0.79
RPGR-202ENST00000339363 PIK3AP1Q6ZUJ8 805 aa10.11□□□□□ -0.79
RPGR-202ENST00000339363 C3orf67Q6ZVT6 689 aa10.11□□□□□ -0.79
RPGR-202ENST00000339363 DNAJC9Q8WXX5 260 aa10.11□□□□□ -0.79
RPGR-202ENST00000339363 GPKOWQ92917 476 aaPredicted RBP eCLIP10.11□□□□□ -0.79
RPGR-202ENST00000339363 CNOT10Q9H9A5 744 aaKnown RBP10.11□□□□□ -0.79
RPGR-202ENST00000339363 FAM207AQ9NSI2 230 aaPredicted RBP10.11□□□□□ -0.79
RPGR-202ENST00000339363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.792e-6■■■□□ 17.4
RPGR-202ENST00000339363 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.11□□□□□ -0.794e-9■■■■□ 22.8
RPGR-202ENST00000339363 PAIP2BQ9ULR5 123 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms