RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 MTFR1Q15390 333 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 TSR1Q2NL82 804 aaKnown RBP11.99□□□□□ -0.49
RTN3-201ENST00000338850 HSP90AA4PQ58FG1 418 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 ZNF569Q5MCW4 686 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 BEND6Q5SZJ8 279 aaPredicted RBP11.99□□□□□ -0.49
RTN3-201ENST00000338850 TREML2Q5T2D2 321 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 TYW1BQ6NUM6 668 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 HDXQ7Z353 690 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 ZNF572Q7Z3I7 529 aaPredicted RBP11.99□□□□□ -0.49
RTN3-201ENST00000338850 NEK8Q86SG6 692 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 MAPKAPK5Q8IW41 473 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 SMYD4Q8IYR2 804 aaPredicted RBP11.99□□□□□ -0.49
RTN3-201ENST00000338850 ZNF444Q8N0Y2 327 aaPredicted RBP11.99□□□□□ -0.49
RTN3-201ENST00000338850 SLC35F6Q8N357 371 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 PROCA1Q8NCQ7 364 aaPredicted RBP11.99□□□□□ -0.49
RTN3-201ENST00000338850 ZNF280CQ8ND82 737 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 RAET1EQ8TD07 263 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 TGFBRAP1Q8WUH2 860 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 P2RX5Q93086 422 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 EIF3CQ99613 913 aaKnown RBP11.99□□□□□ -0.49
RTN3-201ENST00000338850 TMEM47Q9BQJ4 181 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 TRIM9Q9C026 710 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 BLZF1Q9H2G9 400 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 DHX36Q9H2U1 1008 aaKnown RBP11.99□□□□□ -0.49
RTN3-201ENST00000338850 ACBD3Q9H3P7 528 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 RIOX1Q9H6W3 641 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 ANKZF1Q9H8Y5 726 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 EXOC1Q9NV70 894 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 TAB2Q9NYJ8 693 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 PI4KBQ9UBF8 816 aa11.99□□□□□ -0.49
RTN3-201ENST00000338850 CENPFP49454 3210 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 SIPA1L1O43166 1804 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 USP17L5A8MUK1 530 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 KRT86O43790 486 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 SASH3O75995 380 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 LCA5LO95447 670 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 CASP1P29466 404 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 CCT6AP40227 531 aaKnown RBP11.98□□□□□ -0.49
RTN3-201ENST00000338850 SMC1AQ14683 1233 aaKnown RBP11.98□□□□□ -0.49
RTN3-201ENST00000338850 SLC35G1Q2M3R5 365 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 ASPRV1Q53RT3 343 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 IQCEQ6IPM2 695 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 CABP7Q86V35 215 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 TEX2Q8IWB9 1127 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 SMCR8Q8TEV9 937 aaPredicted RBP11.98□□□□□ -0.49
RTN3-201ENST00000338850 NAP1L4Q99733 375 aaKnown RBP11.98□□□□□ -0.49
RTN3-201ENST00000338850 RAB34Q9BZG1 259 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 TMEM60Q9H2L4 133 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 DNAJC18Q9H819 358 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 MKNK2Q9HBH9 465 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 LZTFL1Q9NQ48 299 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 GABRQQ9UN88 632 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 GDAQ9Y2T3 454 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 MYH4Q9Y623 1939 aa11.98□□□□□ -0.49
RTN3-201ENST00000338850 ATP8B3O60423 1300 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 hCG_1642624A0A1W2PR95 340 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 TTC26A0AVF1 554 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 SNHG28P0DPA3 235 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 PRLRP16471 622 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 OAS2P29728 719 aaKnown RBP11.97□□□□□ -0.49
RTN3-201ENST00000338850 HMGCS2P54868 508 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 JAG1P78504 1218 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 LRRC63Q05C16 580 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 PSMD2Q13200 908 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 PDIA5Q14554 519 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 MAP9Q49MG5 647 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 SH3D19Q5HYK7 790 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 CENPPQ6IPU0 288 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 STAG2Q8N3U4 1231 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 GUF1Q8N442 669 aaKnown RBP11.97□□□□□ -0.49
RTN3-201ENST00000338850 CCDC155Q8N6L0 562 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 ACRBPQ8NEB7 543 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 RRP36Q96EU6 259 aaKnown RBP11.97□□□□□ -0.49
RTN3-201ENST00000338850 DUSP9Q99956 384 aaKnown RBP11.97□□□□□ -0.49
RTN3-201ENST00000338850 WDR18Q9BV38 432 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 GLT8D2Q9H1C3 349 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 VPS16Q9H269 839 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 MED4Q9NPJ6 270 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 PNMA3Q9UL41 463 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 MYO6Q9UM54 1294 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 L1RE1Q9UN81 338 aa11.97□□□□□ -0.49
RTN3-201ENST00000338850 REXO2Q9Y3B8 237 aaKnown RBP11.97□□□□□ -0.49
RTN3-201ENST00000338850 KLRF2D3W0D1 207 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 TNPO2O14787 897 aaKnown RBP11.96□□□□□ -0.49
RTN3-201ENST00000338850 RPS6KA5O75582 802 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 IPO7O95373 1038 aaKnown RBP11.96□□□□□ -0.49
RTN3-201ENST00000338850 CCL5P13501 91 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 PLCG1P19174 1290 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 FLT3LGP49771 235 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 PTPN21Q16825 1174 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 FAM110CQ1W6H9 321 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 INF2Q27J81 1249 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 SHROOM1Q2M3G4 852 aaPredicted RBP11.96□□□□□ -0.49
RTN3-201ENST00000338850 WDR59Q6PJI9 974 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 UNC13DQ70J99 1090 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 ANKRD13CQ8N6S4 541 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 GPKOWQ92917 476 aaPredicted RBP eCLIP11.96□□□□□ -0.49
RTN3-201ENST00000338850 CALML4Q96GE6 196 aa11.96□□□□□ -0.49
RTN3-201ENST00000338850 MTMR9Q96QG7 549 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms