RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SPATA31A5Q5VU36 1347 aa18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 SPATA31A7Q8IWB4 1347 aa18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 HEXIM1O94992 359 aaKnown RBP18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 MSL3Q8N5Y2 521 aaKnown RBP18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 CUL5Q93034 780 aa18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 RIC8AQ9NPQ8 531 aa18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 ZSCAN5CA6NGD5 496 aaPredicted RBP18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 AARSP49588 968 aaKnown RBP eCLIP18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 SCNN1DP51172 638 aa18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 PPFIA1Q13136 1202 aa18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 KCTD19Q17RG1 926 aaPredicted RBP18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 IFT20Q8IY31 132 aa18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.14■□□□□ 0.49
CDC42EP4-201ENST00000335793 EPHB4P54760 987 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 CDK17Q00537 523 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 NAA25Q14CX7 972 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 FAM196AQ6ZSG2 479 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 AMIGO3Q86WK7 504 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 DNAAF5Q86Y56 855 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 FAXDC2Q96IV6 333 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 CCDC43Q96MW1 224 aaKnown RBP18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 POTEB3A0JP26 581 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 POTECB2RU33 542 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 CAND2O75155 1236 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 SLURP2P0DP57 97 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 CALRP27797 417 aaKnown RBP18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 POTEBQ6S5H4 581 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 ADGRF4Q8IZF3 695 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 MMGT1Q8N4V1 131 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 SH2D3CQ8N5H7 860 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 MTMR9Q96QG7 549 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 MTMR4Q9NYA4 1195 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 PLCH1Q4KWH8 1693 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 MEIS1O00470 390 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 KRT14P02533 472 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 NEDD9Q14511 834 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 NBPF20Q3BBV1 942 aa18.13■□□□□ 0.49
CDC42EP4-201ENST00000335793 ARAP2Q8WZ64 1704 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 USP17L10C9JJH3 530 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 AGPSO00116 658 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 KCNK3O14649 394 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 CETN3O15182 167 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 PRPF6O94906 941 aaKnown RBP18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 E2F5Q15329 346 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 ASIC2Q16515 512 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 ECM1Q16610 540 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 ZNF662Q6ZS27 426 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 TLR10Q9BXR5 811 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 GOLPH3Q9H4A6 298 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 USP21Q9UK80 565 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 GPR75-ASB3A0A0A6YYF3 556 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 KLRC1P26715 233 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 STAT3P40763 770 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 CARSP49589 748 aaKnown RBP18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 FXR2P51116 673 aaKnown RBP eCLIP18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 CCNHP51946 323 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 CLNS1AP54105 237 aaKnown RBP18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 ASPRV1Q53RT3 343 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 PROCA1Q8NCQ7 364 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 EMILIN3Q9NT22 766 aa18.12■□□□□ 0.49
CDC42EP4-201ENST00000335793 PLA2G4BP0C869 781 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 IRAK1P51617 712 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 ARL8AQ96BM9 186 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 PURBQ96QR8 312 aaKnown RBP18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 DOT1LQ8TEK3 1739 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 CPP00450 1065 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 SERPING1P05155 500 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 KCNMA1Q12791 1236 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 PDIA5Q14554 519 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 EME2A4GXA9 379 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 NDUFAB1O14561 156 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 CEP104O60308 925 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 AP1G2O75843 785 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 NR2F2P24468 414 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 GCKP35557 465 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 PSMD2Q13200 908 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 PABPC4Q13310 644 aaKnown RBP eCLIP18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 PDCLQ13371 301 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 KLHDC7AQ5VTJ3 777 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 HAUS3Q68CZ6 603 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 LRRC55Q6ZSA7 311 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 TSEN2Q8NCE0 465 aaKnown RBP18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 AENQ8WTP8 325 aaKnown RBP18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 BAP1Q92560 729 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 PACSIN1Q9BY11 444 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 FGFBP2Q9BYJ0 223 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 RIOX1Q9H6W3 641 aa18.11■□□□□ 0.49
CDC42EP4-201ENST00000335793 PNMA6FA0A0J9YX94 578 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 TTLL1O95922 423 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 ACTN1P12814 892 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 SNAP25P60880 206 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 TCP10Q12799 353 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 PIK3R5Q8WYR1 880 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 THOC1Q96FV9 657 aaKnown RBP18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 JMJD4Q9H9V9 463 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 USP40Q9NVE5 1235 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 CEP72Q9P209 647 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 CNTNAP4Q9C0A0 1308 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 A0A087X0T9 212 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms