RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 FERP16591 822 aa7.52□□□□□ -1.2
SF3B1-201ENST00000335508 SLC26A2P50443 739 aa7.52□□□□□ -1.2
SF3B1-201ENST00000335508 TERF1P54274 439 aa7.52□□□□□ -1.2
SF3B1-201ENST00000335508 PPATQ06203 517 aa7.52□□□□□ -1.2
SF3B1-201ENST00000335508 POMGNT1Q8WZA1 660 aa7.52□□□□□ -1.2
SF3B1-201ENST00000335508 PGBD1Q96JS3 809 aa7.52□□□□□ -1.2
SF3B1-201ENST00000335508 ANKEF1Q9NU02 776 aa7.52□□□□□ -1.2
SF3B1-201ENST00000335508 ZNF233A6NK53 670 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 VGLL3A8MV65 326 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 TCP1P17987 556 aaKnown RBP7.52□□□□□ -1.21
SF3B1-201ENST00000335508 EPHX2P34913 555 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 PTK2Q05397 1052 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 MCM6Q14566 821 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 SYCE1Q8N0S2 351 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 MKNK1Q9BUB5 465 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 THAP9Q9H5L6 903 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 KMT5AQ9NQR1 393 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 NUB1Q9Y5A7 615 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 RPS6P62753 249 aaKnown RBP7.52□□□□□ -1.21
SF3B1-201ENST00000335508 ARID5AQ03989 594 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 FAM102BQ5T8I3 360 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 ARFGAP2Q8N6H7 521 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 CCDC127Q96BQ5 260 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 TYW1Q9NV66 732 aaKnown RBP7.52□□□□□ -1.21
SF3B1-201ENST00000335508 GVINP1Q7Z2Y8 2422 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 LTBP3Q9NS15 1303 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 PDXKO00764 312 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 PRPF4BQ13523 1007 aaKnown RBP7.52□□□□□ -1.21
SF3B1-201ENST00000335508 HLTFQ14527 1009 aaKnown RBP eCLIP7.52□□□□□ -1.214e-9■□□□□ 9.4
SF3B1-201ENST00000335508 TTBK2Q6IQ55 1244 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 ZNF710Q8N1W2 664 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 GPRC5AQ8NFJ5 357 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 TRIM58Q8NG06 486 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 KIAA1524Q8TCG1 905 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 OXER1Q8TDS5 423 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 GUCA1BQ9UMX6 200 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 POTEMA6NI47 508 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 ASAP2O43150 1006 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 TDP2O95551 362 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 RFX1P22670 979 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 ACER1Q8TDN7 264 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 MAIP1Q8WWC4 291 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 FAM212AQ96EL1 285 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 PAGE5Q96GU1 130 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 NDST4Q9H3R1 872 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 ARFGAP3Q9NP61 516 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 RNF216Q9NWF9 866 aaPredicted RBP7.52□□□□□ -1.21
SF3B1-201ENST00000335508 CCL15-CCL14A0A0B4J2E2 113 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 FXR2P51116 673 aaKnown RBP eCLIP7.52□□□□□ -1.213e-8■■■■□ 19.5
SF3B1-201ENST00000335508 CCL15Q16663 113 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 METTL13Q8N6R0 699 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 CACTINQ8WUQ7 758 aaKnown RBP7.52□□□□□ -1.21
SF3B1-201ENST00000335508 HVCN1Q96D96 273 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 PDCD2LQ9BRP1 358 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 IFT122Q9HBG6 1241 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 NLRC4Q9NPP4 1024 aa7.52□□□□□ -1.21
SF3B1-201ENST00000335508 BAZ2BQ9UIF8 2168 aaKnown RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 IBSPP21815 317 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 CYP2J2P51589 502 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 GTF2A2P52657 109 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 CERS5Q8N5B7 392 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 MTMR14Q8NCE2 650 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 TRIM11Q96F44 468 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 BPIFA3Q9BQP9 254 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 ATP6V0A4Q9HBG4 840 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 LOC102724159A0A0B4J2E5 919 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 UNCXA6NJT0 531 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 SREBF1P36956 1147 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 STAT5BP51692 787 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 BMS1Q14692 1282 aaKnown RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 PWP2Q15269 919 aaKnown RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 BTNL9Q6UXG8 535 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 PROCA1Q8NCQ7 364 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 CNOT6LQ96LI5 555 aaKnown RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 IFIH1Q9BYX4 1025 aaKnown RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 JPH1Q9HDC5 661 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 EPN1Q9Y6I3 576 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 STXBP3O00186 592 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 PHKA2P46019 1235 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 CALCOCO2Q13137 446 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 ASIC2Q16515 512 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 CROCCP2Q86T23 111 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 CCDC170Q8IYT3 715 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 NCAPGQ9BPX3 1015 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 CTTNBP2NLQ9P2B4 639 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 RASAL2Q9UJF2 1139 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 MON2Q7Z3U7 1717 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 DYNC1I1O14576 645 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 SPOPO43791 374 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 GGPS1O95749 300 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 AP3M2P53677 418 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 GABPAQ06546 454 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 DCUN1D2Q6PH85 259 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 CEP128Q6ZU80 1094 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 RRAGAQ7L523 313 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 PIK3R5Q8WYR1 880 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 RNF14Q9UBS8 474 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 SEPT9Q9UHD8 586 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 FBXO2Q9UK22 296 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 LRRC37A3O60309 1634 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms