RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 CDC37Q16543 378 aaPredicted RBP15.3■□□□□ 0.04
SF1-202ENST00000334944 SND1Q7KZF4 910 aaKnown RBP eCLIP15.3■□□□□ 0.04
SF1-202ENST00000334944 ZNF185O15231 689 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 PPP1R12BO60237 982 aaPredicted RBP15.3■□□□□ 0.04
SF1-202ENST00000334944 ALDH1B1P30837 517 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.044e-18■■□□□ 13.9
SF1-202ENST00000334944 MRPL12P52815 198 aaKnown RBP15.3■□□□□ 0.04
SF1-202ENST00000334944 TRIM14Q14142 442 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 SIAH1Q8IUQ4 282 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 MSL3Q8N5Y2 521 aaKnown RBP15.3■□□□□ 0.04
SF1-202ENST00000334944 MASTLQ96GX5 879 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 DNAJC7Q99615 494 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 SWAP70Q9UH65 585 aa15.3■□□□□ 0.04
SF1-202ENST00000334944 ANKRD31Q8N7Z5 1873 aa15.29■□□□□ 0.04
SF1-202ENST00000334944 FECHP22830 423 aa15.29■□□□□ 0.04
SF1-202ENST00000334944 CLNS1AP54105 237 aaKnown RBP15.29■□□□□ 0.04
SF1-202ENST00000334944 PPFIA1Q13136 1202 aa15.29■□□□□ 0.04
SF1-202ENST00000334944 EZH2Q15910 746 aaKnown RBP15.29■□□□□ 0.04
SF1-202ENST00000334944 ENOX2Q16206 610 aaKnown RBP15.29■□□□□ 0.04
SF1-202ENST00000334944 PRR16Q569H4 304 aa15.29■□□□□ 0.04
SF1-202ENST00000334944 BCAS3Q9H6U6 928 aa15.29■□□□□ 0.04
SF1-202ENST00000334944 NHEJ1Q9H9Q4 299 aaPredicted RBP15.29■□□□□ 0.04
SF1-202ENST00000334944 CHUKO15111 745 aa15.29■□□□□ 0.04
SF1-202ENST00000334944 CCNHP51946 323 aaPredicted RBP15.29■□□□□ 0.04
SF1-202ENST00000334944 ICA1Q05084 483 aa15.29■□□□□ 0.04
SF1-202ENST00000334944 WHAMMP3Q1A5X7 153 aa15.29■□□□□ 0.04
SF1-202ENST00000334944 HHIPL2Q6UWX4 724 aa15.29■□□□□ 0.04
SF1-202ENST00000334944 UNC13DQ70J99 1090 aa15.29■□□□□ 0.04
SF1-202ENST00000334944 PLIN4Q96Q06 1357 aa15.29■□□□□ 0.04
SF1-202ENST00000334944 POTEFA5A3E0 1075 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 ATP1A1P05023 1023 aaKnown RBP15.28■□□□□ 0.04
SF1-202ENST00000334944 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 PEX19P40855 299 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 WDR93Q6P2C0 686 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 POTEGQ6S5H5 508 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 POTEEQ6S8J3 1075 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 ANKRD13CQ8N6S4 541 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 CYP2W1Q8TAV3 490 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 CALR3Q96L12 384 aaKnown RBP15.28■□□□□ 0.04
SF1-202ENST00000334944 RAB34Q9BZG1 259 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 MYH7BA7E2Y1 1941 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 A0A1W2PQC6 194 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 MATR3P43243 847 aaKnown RBP eCLIP15.28■□□□□ 0.04
SF1-202ENST00000334944 SEC24CP53992 1094 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 RRP1BQ14684 758 aaKnown RBP15.28■□□□□ 0.04
SF1-202ENST00000334944 NAA25Q14CX7 972 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 GPATCH4Q5T3I0 446 aaKnown RBP15.28■□□□□ 0.04
SF1-202ENST00000334944 CENPPQ6IPU0 288 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 TTYH3Q9C0H2 523 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 KLC4Q9NSK0 619 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 FAM170AA1A519 330 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 EME2A4GXA9 379 aaPredicted RBP15.28■□□□□ 0.04
SF1-202ENST00000334944 GH2P01242 217 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 CLK2P49760 499 aaKnown RBP15.28■□□□□ 0.04
SF1-202ENST00000334944 CEP85LQ5SZL2 805 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 HDAC7Q8WUI4 952 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 PSMB7Q99436 277 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 NDST4Q9H3R1 872 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 MAGEF1Q9HAY2 307 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 NLRC4Q9NPP4 1024 aa15.28■□□□□ 0.04
SF1-202ENST00000334944 SMCHD1A6NHR9 2005 aa15.27■□□□□ 0.04
SF1-202ENST00000334944 F5H6K3 240 aa15.27■□□□□ 0.04
SF1-202ENST00000334944 PSMC6P62333 389 aa15.27■□□□□ 0.04
SF1-202ENST00000334944 GUCY1A3Q02108 690 aa15.27■□□□□ 0.04
SF1-202ENST00000334944 CYP4A11Q02928 519 aa15.27■□□□□ 0.04
SF1-202ENST00000334944 KLRC3Q07444 240 aa15.27■□□□□ 0.04
SF1-202ENST00000334944 C2orf54Q08AI8 447 aa15.27■□□□□ 0.04
SF1-202ENST00000334944 COASYQ13057 564 aa15.27■□□□□ 0.04
SF1-202ENST00000334944 IFT88Q13099 833 aa15.27■□□□□ 0.04
SF1-202ENST00000334944 ZYXQ15942 572 aaKnown RBP15.27■□□□□ 0.04
SF1-202ENST00000334944 TMC4Q7Z404 712 aa15.27■□□□□ 0.04
SF1-202ENST00000334944 ZNHIT6Q9NWK9 470 aaKnown RBP15.27■□□□□ 0.04
SF1-202ENST00000334944 TRAF5O00463 557 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 ZNF263O14978 683 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 C21orf2O43822 256 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 UBXN2AP68543 259 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 SF3A3Q12874 501 aaKnown RBP eCLIP15.27■□□□□ 0.034e-7■■■□□ 14.8
SF1-202ENST00000334944 DACT2Q5SW24 774 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 RRAGAQ7L523 313 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 CAGE1Q8TC20 777 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 JAKMIP2Q96AA8 810 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 PRMT6Q96LA8 375 aaPredicted RBP15.27■□□□□ 0.03
SF1-202ENST00000334944 ZDHHC15Q96MV8 337 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 ANO3Q9BYT9 981 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 PANK4Q9NVE7 773 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 STK17AQ9UEE5 414 aa15.27■□□□□ 0.03
SF1-202ENST00000334944 DDX20Q9UHI6 824 aaKnown RBP15.27■□□□□ 0.03
SF1-202ENST00000334944 TCP10L2B9ZVM9 353 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 MEFVO15553 781 aaPredicted RBP15.26■□□□□ 0.03
SF1-202ENST00000334944 CDC25CP30307 473 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 AMPD2Q01433 879 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 SLC7A5Q01650 507 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 VWA3BQ502W6 1294 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 VIPAS39Q9H9C1 493 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 PI4KBQ9UBF8 816 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 SUGT1Q9Y2Z0 365 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
SF1-202ENST00000334944 BRWD3Q6RI45 1802 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms