RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 NR5A1Q13285 461 aa20.87■□□□□ 0.93
HLA-F-217ENST00000334668 Q4G0T1 1027 aa20.87■□□□□ 0.93
HLA-F-217ENST00000334668 PRR16Q569H4 304 aa20.87■□□□□ 0.93
HLA-F-217ENST00000334668 SEPT1Q8WYJ6 367 aa20.87■□□□□ 0.93
HLA-F-217ENST00000334668 GDF15Q99988 308 aa20.87■□□□□ 0.93
HLA-F-217ENST00000334668 JPH1Q9HDC5 661 aaPredicted RBP20.87■□□□□ 0.93
HLA-F-217ENST00000334668 PKD2L1Q9P0L9 805 aa20.87■□□□□ 0.93
HLA-F-217ENST00000334668 SLC9A2Q9UBY0 812 aa20.87■□□□□ 0.93
HLA-F-217ENST00000334668 MYH9P35579 1960 aaKnown RBP20.86■□□□□ 0.93
HLA-F-217ENST00000334668 CCDC194A0A1B0GVG4 234 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 IPO5O00410 1097 aaKnown RBP20.86■□□□□ 0.93
HLA-F-217ENST00000334668 TLR3O15455 904 aaKnown RBP20.86■□□□□ 0.93
HLA-F-217ENST00000334668 B4GALT4O60513 344 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 TRIM29Q14134 588 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 MFSD10Q14728 455 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 INF2Q27J81 1249 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 EARS2Q5JPH6 523 aaKnown RBP20.86■□□□□ 0.93
HLA-F-217ENST00000334668 FBXO18Q8NFZ0 1043 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 C8orf76Q96K31 380 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 SDF4Q9BRK5 362 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 TRPV6Q9H1D0 765 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 BRMS1Q9HCU9 246 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 TMEM39AQ9NV64 488 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 PRKAG2Q9UGJ0 569 aa20.86■□□□□ 0.93
HLA-F-217ENST00000334668 BTBD18B2RXH4 712 aa20.85■□□□□ 0.93
HLA-F-217ENST00000334668 H3BRB1 525 aa20.85■□□□□ 0.93
HLA-F-217ENST00000334668 ATG7O95352 703 aa20.85■□□□□ 0.93
HLA-F-217ENST00000334668 ITGB8P26012 769 aa20.85■□□□□ 0.93
HLA-F-217ENST00000334668 MAGEA10P43363 369 aaPredicted RBP20.85■□□□□ 0.93
HLA-F-217ENST00000334668 KIAA0753Q2KHM9 967 aa20.85■□□□□ 0.93
HLA-F-217ENST00000334668 DIS3L2Q8IYB7 885 aaKnown RBP20.85■□□□□ 0.93
HLA-F-217ENST00000334668 ZNF577Q9BSK1 485 aa20.85■□□□□ 0.93
HLA-F-217ENST00000334668 TUT1Q9H6E5 874 aaKnown RBP20.85■□□□□ 0.93
HLA-F-217ENST00000334668 TBC1D22BQ9NU19 505 aa20.85■□□□□ 0.93
HLA-F-217ENST00000334668 MSH4O15457 936 aa20.84■□□□□ 0.93
HLA-F-217ENST00000334668 LGR5O75473 907 aa20.84■□□□□ 0.93
HLA-F-217ENST00000334668 HOXC8P31273 242 aa20.84■□□□□ 0.93
HLA-F-217ENST00000334668 TCF7P36402 384 aaPredicted RBP20.84■□□□□ 0.93
HLA-F-217ENST00000334668 VASPP50552 380 aaPredicted RBP20.84■□□□□ 0.93
HLA-F-217ENST00000334668 SP4Q02446 784 aa20.84■□□□□ 0.93
HLA-F-217ENST00000334668 CUL4AQ13619 759 aa20.84■□□□□ 0.93
HLA-F-217ENST00000334668 PPP4R3AQ6IN85 833 aa20.84■□□□□ 0.93
HLA-F-217ENST00000334668 PIK3AP1Q6ZUJ8 805 aa20.84■□□□□ 0.93
HLA-F-217ENST00000334668 NEK8Q86SG6 692 aa20.84■□□□□ 0.93
HLA-F-217ENST00000334668 FAM184AQ8NB25 1140 aa20.84■□□□□ 0.93
HLA-F-217ENST00000334668 CTAGE1Q96RT6 745 aa20.84■□□□□ 0.93
HLA-F-217ENST00000334668 PRDM5Q9NQX1 630 aaPredicted RBP20.84■□□□□ 0.93
HLA-F-217ENST00000334668 TRMT13Q9NUP7 481 aaKnown RBP20.84■□□□□ 0.93
HLA-F-217ENST00000334668 GTF2IRD1Q9UHL9 959 aa20.84■□□□□ 0.93
HLA-F-217ENST00000334668 EMSYQ7Z589 1322 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 TDP2O95551 362 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 CCNE2O96020 404 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 SUPT20HL2P0C7V6 817 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 BMP8BP34820 402 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 FOSBP53539 338 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 ACTR2P61160 394 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 ASTLQ6HA08 431 aaPredicted RBP20.83■□□□□ 0.93
HLA-F-217ENST00000334668 TRIM50Q86XT4 487 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 PPP1R13LQ8WUF5 828 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 SLC5A5Q92911 643 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 PCYT2Q99447 389 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 PCDH10Q9P2E7 1040 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 HDAC6Q9UBN7 1215 aa20.83■□□□□ 0.93
HLA-F-217ENST00000334668 IGKV6D-21A0A0A0MT36 114 aa20.82■□□□□ 0.92
HLA-F-217ENST00000334668 FAM205CA6NFA0 338 aa20.82■□□□□ 0.92
HLA-F-217ENST00000334668 TIMP1P01033 207 aa20.82■□□□□ 0.92
HLA-F-217ENST00000334668 GCFC2P16383 781 aaKnown RBP20.82■□□□□ 0.92
HLA-F-217ENST00000334668 GDF6Q6KF10 455 aaPredicted RBP20.82■□□□□ 0.92
HLA-F-217ENST00000334668 ABHD15Q6UXT9 468 aa20.82■□□□□ 0.92
HLA-F-217ENST00000334668 ETNPPLQ8TBG4 499 aa20.82■□□□□ 0.92
HLA-F-217ENST00000334668 RIT2Q99578 217 aa20.82■□□□□ 0.92
HLA-F-217ENST00000334668 ZNF215Q9UL58 517 aaPredicted RBP20.82■□□□□ 0.92
HLA-F-217ENST00000334668 LAMA3Q16787 3333 aa20.81■□□□□ 0.92
HLA-F-217ENST00000334668 ATMINO43313 823 aaPredicted RBP20.81■□□□□ 0.92
HLA-F-217ENST00000334668 GUCY1B3Q02153 619 aa20.81■□□□□ 0.92
HLA-F-217ENST00000334668 SAFBQ15424 915 aaKnown RBP eCLIP20.81■□□□□ 0.92
HLA-F-217ENST00000334668 LETM2Q2VYF4 491 aa20.81■□□□□ 0.92
HLA-F-217ENST00000334668 FAM47CQ5HY64 1035 aa20.81■□□□□ 0.92
HLA-F-217ENST00000334668 UTP14CQ5TAP6 766 aaKnown RBP20.81■□□□□ 0.92
HLA-F-217ENST00000334668 ZNF746Q6NUN9 644 aaPredicted RBP20.81■□□□□ 0.92
HLA-F-217ENST00000334668 C7orf31Q8N865 590 aa20.81■□□□□ 0.92
HLA-F-217ENST00000334668 NAP1L4Q99733 375 aaKnown RBP20.81■□□□□ 0.92
HLA-F-217ENST00000334668 NOC4LQ9BVI4 516 aaKnown RBP20.81■□□□□ 0.92
HLA-F-217ENST00000334668 FOXP1Q9H334 677 aaPredicted RBP20.81■□□□□ 0.92
HLA-F-217ENST00000334668 SMARCAD1Q9H4L7 1026 aa20.81■□□□□ 0.92
HLA-F-217ENST00000334668 DDX25Q9UHL0 483 aaKnown RBP20.81■□□□□ 0.92
HLA-F-217ENST00000334668 SLC37A4O43826 429 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 PSMD10O75832 226 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 RAG1P15918 1043 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 MDM2Q00987 491 aaPredicted RBP20.8■□□□□ 0.92
HLA-F-217ENST00000334668 KRT76Q01546 638 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 HIC1Q14526 733 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 B3GNT9Q6UX72 402 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 PLPPR4Q7Z2D5 763 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 BADQ92934 168 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 FAM212AQ96EL1 285 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 UIMC1Q96RL1 719 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 LBHD1Q9BQE6 289 aaPredicted RBP20.8■□□□□ 0.92
HLA-F-217ENST00000334668 RNPEPQ9H4A4 650 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 KCNMB3Q9NPA1 279 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms