RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 HABP4Q5JVS0 413 aaKnown RBP10.55□□□□□ -0.72
COL4A6-201ENST00000334504 MCF2L2Q86YR7 1114 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 WDR75Q8IWA0 830 aaKnown RBP10.55□□□□□ -0.72
COL4A6-201ENST00000334504 SLC26A7Q8TE54 656 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 DISC1Q9NRI5 854 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 BCS1LQ9Y276 419 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 L3MBTL1Q9Y468 752 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 SPDYE2BA6NHP3 402 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 SPDYE6P0CI01 402 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 XKR9Q5GH70 373 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 CCNYQ8ND76 341 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 STK17AQ9UEE5 414 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 SNX24Q9Y343 169 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 DIAPH2O60879 1101 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 FGGP02679 453 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 CYTH1Q15438 398 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 ZC3H12BQ5HYM0 836 aaKnown RBP10.55□□□□□ -0.72
COL4A6-201ENST00000334504 TEDDM1Q5T9Z0 273 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 CATSPER3Q86XQ3 398 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 KCTD6Q8NC69 237 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 CDC26Q8NHZ8 85 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 TGFBRAP1Q8WUH2 860 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 HMGXB3Q12766 1538 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 MFAP3LO75121 409 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 GCFC2P16383 781 aaKnown RBP10.55□□□□□ -0.72
COL4A6-201ENST00000334504 BPIFB4P59827 614 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 TTLL7Q6ZT98 887 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 TMCO5AQ8N6Q1 288 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 ATP6V0A1Q93050 837 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 SH3GL2Q99962 352 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 MAGEF1Q9HAY2 307 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 MID2Q9UJV3 735 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 GNPATO15228 680 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 ABL1P00519 1130 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 PSMC2P35998 433 aaKnown RBP10.55□□□□□ -0.72
COL4A6-201ENST00000334504 TCIRG1Q13488 830 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 NSMFQ6X4W1 530 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 RYBPQ8N488 228 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-201ENST00000334504 THAP11Q96EK4 314 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 KCNG1Q9UIX4 513 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 RNF123Q5XPI4 1314 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 CARMIL3Q8ND23 1372 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 AOC3Q16853 763 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.55□□□□□ -0.72
COL4A6-201ENST00000334504 THAP9Q9H5L6 903 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 OLA1Q9NTK5 396 aaKnown RBP10.55□□□□□ -0.72
COL4A6-201ENST00000334504 POLR3EQ9NVU0 708 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 PMS2P54278 862 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 LRRC14Q15048 493 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 SRRM1Q8IYB3 904 aaKnown RBP10.54□□□□□ -0.72
COL4A6-201ENST00000334504 LSG1Q9H089 658 aaKnown RBP10.54□□□□□ -0.72
COL4A6-201ENST00000334504 PSTPIP2Q9H939 334 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 BATF3Q9NR55 127 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 RHBDL2Q9NX52 303 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 ATP11BQ9Y2G3 1177 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 ZFYVE9O95405 1425 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 GOLGA8SH3BPF8 625 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 IPO5O00410 1097 aaKnown RBP10.54□□□□□ -0.72
COL4A6-201ENST00000334504 ZBED4O75132 1171 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 PALMO75781 387 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 SEC24DO94855 1032 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-201ENST00000334504 UFL1O94874 794 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 RINLQ6ZS11 566 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 TEX9Q8N6V9 391 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 SNRNP27Q8WVK2 155 aaKnown RBP10.54□□□□□ -0.72
COL4A6-201ENST00000334504 EXT2Q93063 718 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 APBA3O96018 575 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 TMEM191BP0C7N4 346 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 ATP1A3P13637 1013 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 ADCK5Q3MIX3 580 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 FAM135BQ49AJ0 1406 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 COG4Q9H9E3 785 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 ARFIP2P53365 341 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 NLRX1Q86UT6 975 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 RASSF3Q86WH2 238 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 MB21D1Q8N884 522 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 LPIN2Q92539 896 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 ATP6V1G3Q96LB4 118 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 ANTXR1Q9H6X2 564 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 CYP4F11Q9HBI6 524 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 PLB1Q6P1J6 1458 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 FLT4P35916 1363 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 USP27XA6NNY8 438 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 PI4K2BG5E9Z4 385 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 SLC4A1P02730 911 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 HSPD1P10809 573 aaKnown RBP10.54□□□□□ -0.72
COL4A6-201ENST00000334504 CYP2C19P33261 490 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 GUCY1A3Q02108 690 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 PDXDC1Q6P996 788 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 ACAD11Q709F0 780 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 EYA1Q99502 592 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 ADA2Q9NZK5 511 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 ARPP21Q9UBL0 812 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-201ENST00000334504 KIAA1024Q9UPX6 916 aa10.54□□□□□ -0.72
COL4A6-201ENST00000334504 DEAF1O75398 565 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 KCNA3P22001 575 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 ATP6V1E1P36543 226 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 DMP1Q13316 513 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 METTL13Q8N6R0 699 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms