RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 LONRF2Q1L5Z9 754 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 FAM114A1Q8IWE2 563 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 CCDC65Q8IXS2 484 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 TRPC6Q9Y210 931 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 SPDYE5A6NIY4 337 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 TUBB4BP68371 445 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 MTMR1Q13613 665 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 CFAP58Q5T655 872 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 SPAG5Q96R06 1193 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 KDM3AQ9Y4C1 1321 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 ASB14A6NK59 587 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 CYP2B6P20813 491 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 CDC25BP30305 580 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 LONP1P36776 959 aaKnown RBP12.99□□□□□ -0.33
HDAC6-201ENST00000334136 SND1Q7KZF4 910 aaKnown RBP eCLIP12.99□□□□□ -0.33
HDAC6-201ENST00000334136 RIOX1Q9H6W3 641 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 NOGQ13253 232 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 SEPT7Q16181 437 aaKnown RBP12.99□□□□□ -0.33
HDAC6-201ENST00000334136 VPS36Q86VN1 386 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 GOLGA6L10A0A0M3HER8 536 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 SMIM23A6NLE4 172 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 CYP2C8P10632 490 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 GBP2P32456 591 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-201ENST00000334136 CYP26C1Q6V0L0 522 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.99□□□□□ -0.338e-10■■□□□ 12.3
HDAC6-201ENST00000334136 RAET1EQ8TD07 263 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 WNK4Q96J92 1243 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 CCDC114Q96M63 670 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 PARD6BQ9BYG5 372 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 DNAJC18Q9H819 358 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 AGTPBP1Q9UPW5 1226 aa12.99□□□□□ -0.33
HDAC6-201ENST00000334136 IRS2Q9Y4H2 1338 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 TLDC2A0PJX2 215 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 ANKRD62A6NC57 917 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 GOLGA6BA6NDN3 693 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 ZMYND10O75800 440 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 RPS6P62753 249 aaKnown RBP12.98□□□□□ -0.33
HDAC6-201ENST00000334136 RAD51AP2Q09MP3 1159 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 BRD3Q15059 726 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 FAM160B1Q5W0V3 765 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-201ENST00000334136 TMTC1Q8IUR5 882 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 LINC00301Q8NCQ3 95 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 PPM1EQ8WY54 764 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 PHF20Q9BVI0 1012 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 ATRNL1Q5VV63 1379 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 SSR1P43307 286 aaKnown RBP12.98□□□□□ -0.33
HDAC6-201ENST00000334136 XKR9Q5GH70 373 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 DYMQ7RTS9 669 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 RGS22Q8NE09 1264 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 IFT74Q96LB3 600 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 ZMYND12Q9H0C1 365 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 ZNF831Q5JPB2 1677 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 CCDC169A6NNP5 214 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 DNM2P50570 870 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 MFSD14CQ5VZR4 134 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 ATP6V0A1Q93050 837 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 NUDT12Q9BQG2 462 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 SPATC1LQ9H0A9 340 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 NRBP2Q9NSY0 501 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 ROBO3Q96MS0 1386 aa12.98□□□□□ -0.33
HDAC6-201ENST00000334136 VWA5AO00534 786 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 LIG3P49916 1009 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 USP11P51784 963 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 CSRNP2Q9H175 543 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 FAN1Q9Y2M0 1017 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 PFASO15067 1338 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 GSTTP1A0A1W2PQM5 241 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 ENC1O14682 589 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 PPP6R2O75170 966 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 NR3C2P08235 984 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 CDC25AP30304 524 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 NTRK3Q16288 839 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 GRAMD1CQ8IYS0 662 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 RABGGTAQ92696 567 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 MROH8Q9H579 483 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 TNRC6CQ9HCJ0 1690 aaKnown RBP12.97□□□□□ -0.33
HDAC6-201ENST00000334136 BCORQ6W2J9 1755 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 TRPA1O75762 1119 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 SMTNP53814 917 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 HERC4Q5GLZ8 1057 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-201ENST00000334136 CCDC121Q6ZUS5 278 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 SYMPKQ92797 1274 aaKnown RBP12.97□□□□□ -0.33
HDAC6-201ENST00000334136 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 KIAA1024Q9UPX6 916 aa12.97□□□□□ -0.33
HDAC6-201ENST00000334136 ESYT2A0FGR8 921 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 TTLL4Q14679 1199 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 CEP55Q53EZ4 464 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 TTC19Q6DKK2 380 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-201ENST00000334136 CATSPERGQ6ZRH7 1159 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 HS2ST1Q7LGA3 356 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 JAKMIP2Q96AA8 810 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 AK8Q96MA6 479 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 MYH2Q9UKX2 1941 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 A0A1W2PQ27 194 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 A0A1W2PQ64 194 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 A0A1W2PQD8 194 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms