RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 NCLNQ969V3 563 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 ADGRA3Q8IWK6 1321 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 GOLGA8IPA6NC78 632 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 C16orf96A6NNT2 1141 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 ZNF263O14978 683 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 SLC9A1P19634 815 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 HABP4Q5JVS0 413 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 SPOUT1Q5T280 376 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 TRPM8Q7Z2W7 1104 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 PKD2L2Q9NZM6 624 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 P4HA2O15460 535 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 P4HA1P13674 534 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 BFSP1Q12934 665 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 ADCK1Q86TW2 530 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 MYCT1Q8N699 235 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 UBN1Q9NPG3 1134 aa11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 MAGED2Q9UNF1 606 aaPredicted RBP11.1□□□□□ -0.63
SPTBN1-201ENST00000333896 WDR47O94967 919 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 LRIG3Q6UXM1 1119 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 NUP107P57740 925 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 YWHAGP61981 247 aaKnown RBP eCLIP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 MRPS26Q9BYN8 205 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 NOD2Q9HC29 1040 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 TAB2Q9NYJ8 693 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 DLGAP2Q9P1A6 1054 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 BIN2Q9UBW5 565 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 HAUS3Q68CZ6 603 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 CAAP1Q9H8G2 361 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 ATAD2BQ9ULI0 1458 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 MYO5CQ9NQX4 1742 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 TBL3Q12788 808 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 TAGAPQ8N103 731 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 GIPC2Q8TF65 315 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 LSM14BQ9BX40 385 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 FAM207AQ9NSI2 230 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 SYNJ2O15056 1496 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 H0Y3Z8 333 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 N4BP1O75113 896 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 CLASP2O75122 1294 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 MDH1P40925 334 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 TUBA1BP68363 451 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 KRT76Q01546 638 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 TFAP4Q01664 338 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 DEPDC1Q5TB30 811 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 TUBA1AQ71U36 451 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 AHI1Q8N157 1196 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 ABHD8Q96I13 439 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 C19orf44Q9H6X5 657 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 SLC40A1Q9NP59 571 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 ABCF3Q9NUQ8 709 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 PNMA2Q9UL42 364 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 LZTS3O60299 673 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 NSFP46459 744 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 TMED2Q15363 201 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 NOD1Q9Y239 953 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 OCRLQ01968 901 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 Q4G0T1 1027 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 ZCWPW2Q504Y3 356 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 KIAA0825Q8IV33 1275 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 U2AF1L4Q8WU68 220 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 ELAC2Q9BQ52 826 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 EPS8L2Q9H6S3 715 aa11.09□□□□□ -0.63
SPTBN1-201ENST00000333896 IQANK1A0A1B0GTG1 560 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 CEP85Q6P2H3 762 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 ASCC2Q9H1I8 757 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 TBK1Q9UHD2 729 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 ATP5J2-PTCD1G3V325 749 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 LCA5LO95447 670 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 TNNI1P19237 187 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 KDM5CP41229 1560 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 WDR91A4D1P6 747 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 ARHGEF35A5YM69 484 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 KPNA4O00629 521 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 EPM2AIP1Q7L775 607 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 USHBP1Q8N6Y0 703 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 MAGEB6Q8N7X4 407 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 GPR101Q96P66 508 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 CSRNP1Q96S65 589 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 TMOD4Q9NZQ9 345 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 RTEL1-TNFRSF6BF6WH68 1400 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 EXOC1LA0A1B0GW35 172 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 DDX39AO00148 427 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 RASSF9O75901 435 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 VIL1P09327 827 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 TRIM11Q96F44 468 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 NRBP1Q9UHY1 535 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 ANGEL1Q9UNK9 670 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 COL17A1Q9UMD9 1497 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 UQCRFS1P1P0C7P4 283 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 XRCC5P13010 732 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 COPB1P53618 953 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 KRT17Q04695 432 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 BTN2A2Q8WVV5 523 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 KLC2Q9H0B6 622 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 BHMT2Q9H2M3 363 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 CUEDC2Q9H467 287 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 SUGT1Q9Y2Z0 365 aa11.08□□□□□ -0.64
SPTBN1-201ENST00000333896 UGGT2Q9NYU1 1516 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms