RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 WDR18Q9BV38 432 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 GLIS2Q9BZE0 524 aaPredicted RBP19.25■□□□□ 0.67
DDX28-201ENST00000332395 TFR2Q9UP52 801 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 EML1O00423 815 aa19.24■□□□□ 0.67
DDX28-201ENST00000332395 WNT10BO00744 389 aa19.24■□□□□ 0.67
DDX28-201ENST00000332395 GNA14O95837 355 aa19.24■□□□□ 0.67
DDX28-201ENST00000332395 BAG6P46379 1132 aa19.24■□□□□ 0.67
DDX28-201ENST00000332395 CHMP4BP1P59074 171 aa19.24■□□□□ 0.67
DDX28-201ENST00000332395 NBPF9Q3BBW0 867 aa19.24■□□□□ 0.67
DDX28-201ENST00000332395 CEP112Q8N8E3 955 aa19.24■□□□□ 0.67
DDX28-201ENST00000332395 RABGGTAQ92696 567 aa19.24■□□□□ 0.67
DDX28-201ENST00000332395 EIF2AK1Q9BQI3 630 aaKnown RBP19.24■□□□□ 0.67
DDX28-201ENST00000332395 EPC1Q9H2F5 836 aa19.24■□□□□ 0.67
DDX28-201ENST00000332395 PGAP2Q9UHJ9 254 aa19.24■□□□□ 0.67
DDX28-201ENST00000332395 MRPL11Q9Y3B7 192 aaKnown RBP19.24■□□□□ 0.67
DDX28-201ENST00000332395 CCDC155Q8N6L0 562 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 JAKMIP2Q96AA8 810 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 FBXO28Q9NVF7 368 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 KRT86O43790 486 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 CASP5P51878 434 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 MARSP56192 900 aaKnown RBP19.23■□□□□ 0.67
DDX28-201ENST00000332395 SAMD1Q6SPF0 538 aaPredicted RBP19.23■□□□□ 0.67
DDX28-201ENST00000332395 PPP4R3CPQ6ZMV5 832 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 ZC3H3Q8IXZ2 948 aaKnown RBP19.23■□□□□ 0.67
DDX28-201ENST00000332395 SLC16A10Q8TF71 515 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 CCDC42Q96M95 316 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 BHMT2Q9H2M3 363 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 ZSWIM4Q9H7M6 989 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 RGL1Q9NZL6 768 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 PUF60Q9UHX1 559 aaKnown RBP19.23■□□□□ 0.67
DDX28-201ENST00000332395 FEM1BQ9UK73 627 aa19.23■□□□□ 0.67
DDX28-201ENST00000332395 ASNSP08243 561 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 PLEKP08567 350 aaPredicted RBP19.22■□□□□ 0.67
DDX28-201ENST00000332395 MAP3K10Q02779 954 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 KCNMA1Q12791 1236 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 SF3B2Q13435 895 aaKnown RBP19.22■□□□□ 0.67
DDX28-201ENST00000332395 EDRF1Q3B7T1 1238 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 OTOP1Q7RTM1 612 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 SFR1Q86XK3 245 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 NEK11Q8NG66 645 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 SMCR8Q8TEV9 937 aaPredicted RBP19.22■□□□□ 0.67
DDX28-201ENST00000332395 ARHGAP20Q9P2F6 1191 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 RABGAP1Q9Y3P9 1069 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 RCCD1A6NED2 376 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 UBXN2AP68543 259 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 LRCH2Q5VUJ6 765 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 RRAGAQ7L523 313 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 TRIM59Q8IWR1 403 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 EHBP1Q8NDI1 1231 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 BAP1Q92560 729 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 LACRTQ9GZZ8 138 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 EHMT1Q9H9B1 1298 aa19.22■□□□□ 0.67
DDX28-201ENST00000332395 LRRC53A6NM62 1247 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 PSMD10O75832 226 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 EYA4O95677 639 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 AMPD2Q01433 879 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 CYP27A1Q02318 531 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 ADAM9Q13443 819 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 WHAMMP3Q1A5X7 153 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 SLC30A10Q6XR72 485 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 LDHDQ86WU2 507 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 KCTD17Q8N5Z5 321 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 SLC5A5Q92911 643 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 HSD17B14Q9BPX1 270 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 RUSC1Q9BVN2 902 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 EDEM3Q9BZQ6 932 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 MYOZ2Q9NPC6 264 aa19.21■□□□□ 0.67
DDX28-201ENST00000332395 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.21■□□□□ 0.67
DDX28-201ENST00000332395 ZNF263O14978 683 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 TFRCP02786 760 aaKnown RBP19.2■□□□□ 0.66
DDX28-201ENST00000332395 PPP2R5CQ13362 524 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 SPA17Q15506 151 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 CIAPIN1Q6FI81 312 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 TMCO3Q6UWJ1 677 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 EPM2AIP1Q7L775 607 aaPredicted RBP19.2■□□□□ 0.66
DDX28-201ENST00000332395 PIM2Q9P1W9 311 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 MYO6Q9UM54 1294 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 SHTN1A0MZ66 631 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 CETN3O15182 167 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 CHMP2AO43633 222 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 VAV2P52735 878 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 CTTNQ14247 550 aaKnown RBP19.2■□□□□ 0.66
DDX28-201ENST00000332395 KNOP1Q1ED39 458 aaKnown RBP19.2■□□□□ 0.66
DDX28-201ENST00000332395 CEP55Q53EZ4 464 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 CACNA2D4Q7Z3S7 1137 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 TUFT1Q9NNX1 390 aa19.2■□□□□ 0.66
DDX28-201ENST00000332395 RSPH10B2B2RC85 870 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 RSPH10BP0C881 870 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 NR2F2P24468 414 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 PDXDC1Q6P996 788 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 KRT26Q7Z3Y9 468 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 PARD6BQ9BYG5 372 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 ZNF341Q9BYN7 854 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 FAM184BQ9ULE4 1060 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 SCAF8Q9UPN6 1271 aaKnown RBP19.19■□□□□ 0.66
DDX28-201ENST00000332395 TRAF3IP3Q9Y228 551 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 ATAD5Q96QE3 1844 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 GAS7O60861 476 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 TBCAO75347 108 aaKnown RBP19.19■□□□□ 0.66
DDX28-201ENST00000332395 SLITRK3O94933 977 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms