RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 SP4Q02446 784 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 PTGDRQ13258 359 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 PPP2R5CQ13362 524 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 DGKDQ16760 1214 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 BRDTQ58F21 947 aaPredicted RBP18.12■□□□□ 0.49
LRRC28-202ENST00000331450 IPO9Q96P70 1041 aaKnown RBP18.12■□□□□ 0.49
LRRC28-202ENST00000331450 FTOQ9C0B1 505 aaKnown RBP eCLIP18.12■□□□□ 0.49
LRRC28-202ENST00000331450 UNC45AQ9H3U1 944 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 POLR3EQ9NVU0 708 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 EMSYQ7Z589 1322 aa18.12■□□□□ 0.49
LRRC28-202ENST00000331450 IGKV6D-21A0A0A0MT36 114 aa18.11■□□□□ 0.49
LRRC28-202ENST00000331450 KPNA6O60684 536 aa18.11■□□□□ 0.49
LRRC28-202ENST00000331450 BAG4O95429 457 aaKnown RBP18.11■□□□□ 0.49
LRRC28-202ENST00000331450 TCF7P36402 384 aaPredicted RBP18.11■□□□□ 0.49
LRRC28-202ENST00000331450 PRPHP41219 470 aa18.11■□□□□ 0.49
LRRC28-202ENST00000331450 NUCB2P80303 420 aa18.11■□□□□ 0.49
LRRC28-202ENST00000331450 PTPAQ15257 358 aa18.11■□□□□ 0.49
LRRC28-202ENST00000331450 ABHD15Q6UXT9 468 aa18.11■□□□□ 0.49
LRRC28-202ENST00000331450 SMAP1Q8IYB5 467 aaPredicted RBP18.11■□□□□ 0.49
LRRC28-202ENST00000331450 DIS3LQ8TF46 1054 aaKnown RBP18.11■□□□□ 0.49
LRRC28-202ENST00000331450 SEPT1Q8WYJ6 367 aa18.11■□□□□ 0.49
LRRC28-202ENST00000331450 USP28Q96RU2 1077 aa18.11■□□□□ 0.49
LRRC28-202ENST00000331450 C16orf70Q9BSU1 422 aa18.11■□□□□ 0.49
LRRC28-202ENST00000331450 TTC12Q9H892 705 aaPredicted RBP18.11■□□□□ 0.49
LRRC28-202ENST00000331450 CIZ1Q9ULV3 898 aaPredicted RBP18.11■□□□□ 0.49
LRRC28-202ENST00000331450 CLIC4Q9Y696 253 aa18.11■□□□□ 0.49
LRRC28-202ENST00000331450 A0A1W2PQ45 241 aaPredicted RBP18.1■□□□□ 0.49
LRRC28-202ENST00000331450 A0A1W2PQY0 241 aa18.1■□□□□ 0.49
LRRC28-202ENST00000331450 ZEB2O60315 1214 aa18.1■□□□□ 0.49
LRRC28-202ENST00000331450 LGR5O75473 907 aa18.1■□□□□ 0.49
LRRC28-202ENST00000331450 BMP15O95972 392 aa18.1■□□□□ 0.49
LRRC28-202ENST00000331450 F2P00734 622 aa18.1■□□□□ 0.49
LRRC28-202ENST00000331450 MYCNP04198 464 aaPredicted RBP18.1■□□□□ 0.49
LRRC28-202ENST00000331450 LGALS2P05162 132 aa18.1■□□□□ 0.49
LRRC28-202ENST00000331450 SF3A1Q15459 793 aaKnown RBP18.1■□□□□ 0.49
LRRC28-202ENST00000331450 CXCL17Q6UXB2 119 aa18.1■□□□□ 0.49
LRRC28-202ENST00000331450 RDM1Q8NG50 284 aa18.1■□□□□ 0.49
LRRC28-202ENST00000331450 PCYT2Q99447 389 aa18.1■□□□□ 0.49
LRRC28-202ENST00000331450 TCEAL9Q9UHQ7 104 aa18.1■□□□□ 0.49
LRRC28-202ENST00000331450 PCDHA12Q9UN75 941 aa18.1■□□□□ 0.49
LRRC28-202ENST00000331450 MORC2Q9Y6X9 1032 aaPredicted RBP18.1■□□□□ 0.49
LRRC28-202ENST00000331450 WDR64B1ANS9 1081 aa18.09■□□□□ 0.49
LRRC28-202ENST00000331450 MYL3P08590 195 aa18.09■□□□□ 0.49
LRRC28-202ENST00000331450 SUPT20HL2P0C7V6 817 aa18.09■□□□□ 0.49
LRRC28-202ENST00000331450 ZNF286BP0CG31 522 aa18.09■□□□□ 0.49
LRRC28-202ENST00000331450 SFNP31947 248 aa18.09■□□□□ 0.49
LRRC28-202ENST00000331450 TXKP42681 527 aa18.09■□□□□ 0.49
LRRC28-202ENST00000331450 NASPP49321 788 aaPredicted RBP18.09■□□□□ 0.49
LRRC28-202ENST00000331450 JAK3P52333 1124 aa18.09■□□□□ 0.49
LRRC28-202ENST00000331450 ARL6IP4Q66PJ3 421 aaKnown RBP18.09■□□□□ 0.49
LRRC28-202ENST00000331450 KAT2BQ92831 832 aa18.09■□□□□ 0.49
LRRC28-202ENST00000331450 MTG1Q9BT17 334 aaPredicted RBP18.09■□□□□ 0.49
LRRC28-202ENST00000331450 LOXHD1Q8IVV2 1947 aa18.08■□□□□ 0.49
LRRC28-202ENST00000331450 IGSF9BQ9UPX0 1349 aa18.08■□□□□ 0.49
LRRC28-202ENST00000331450 HAS3O00219 553 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 EML1O00423 815 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 CHMP2AO43633 222 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 MARCH6O60337 910 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 CABYRO75952 493 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 FXR2P51116 673 aaKnown RBP eCLIP18.08■□□□□ 0.48
LRRC28-202ENST00000331450 IL17AQ16552 155 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 ATL3Q6DD88 541 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 TRIM50Q86XT4 487 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 CCDC60Q8IWA6 550 aaPredicted RBP18.08■□□□□ 0.48
LRRC28-202ENST00000331450 AFAP1L1Q8TED9 768 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 PAWRQ96IZ0 340 aaKnown RBP18.08■□□□□ 0.48
LRRC28-202ENST00000331450 ZNF396Q96N95 335 aaPredicted RBP18.08■□□□□ 0.48
LRRC28-202ENST00000331450 DISC1Q9NRI5 854 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 CEP131Q9UPN4 1083 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 PCDHA10Q9Y5I2 948 aa18.08■□□□□ 0.48
LRRC28-202ENST00000331450 POTEMA6NI47 508 aa18.07■□□□□ 0.48
LRRC28-202ENST00000331450 MIS18BP1Q6P0N0 1132 aa18.07■□□□□ 0.48
LRRC28-202ENST00000331450 MIER3Q7Z3K6 550 aa18.07■□□□□ 0.48
LRRC28-202ENST00000331450 IGSF22Q8N9C0 903 aa18.07■□□□□ 0.48
LRRC28-202ENST00000331450 GLT1D1Q96MS3 346 aa18.07■□□□□ 0.48
LRRC28-202ENST00000331450 C11orf49Q9H6J7 331 aa18.07■□□□□ 0.48
LRRC28-202ENST00000331450 GRIN2DO15399 1336 aa18.06■□□□□ 0.48
LRRC28-202ENST00000331450 H3BRB1 525 aa18.06■□□□□ 0.48
LRRC28-202ENST00000331450 YEATS4O95619 227 aa18.06■□□□□ 0.48
LRRC28-202ENST00000331450 PSAPP07602 524 aa18.06■□□□□ 0.48
LRRC28-202ENST00000331450 DNM1Q05193 864 aaKnown RBP18.06■□□□□ 0.48
LRRC28-202ENST00000331450 SLC39A14Q15043 492 aa18.06■□□□□ 0.48
LRRC28-202ENST00000331450 UTP14CQ5TAP6 766 aaKnown RBP18.06■□□□□ 0.48
LRRC28-202ENST00000331450 NCAPH2Q6IBW4 605 aa18.06■□□□□ 0.48
LRRC28-202ENST00000331450 NECAB2Q7Z6G3 386 aa18.06■□□□□ 0.48
LRRC28-202ENST00000331450 LINC00301Q8NCQ3 95 aa18.06■□□□□ 0.48
LRRC28-202ENST00000331450 FERMT2Q96AC1 680 aa18.06■□□□□ 0.48
LRRC28-202ENST00000331450 TUT1Q9H6E5 874 aaKnown RBP18.06■□□□□ 0.48
LRRC28-202ENST00000331450 SAMM50Q9Y512 469 aa18.06■□□□□ 0.48
LRRC28-202ENST00000331450 MAFBQ9Y5Q3 323 aaPredicted RBP18.06■□□□□ 0.48
LRRC28-202ENST00000331450 TECP42680 631 aa18.05■□□□□ 0.48
LRRC28-202ENST00000331450 PSEN2P49810 448 aa18.05■□□□□ 0.48
LRRC28-202ENST00000331450 PSMC6P62333 389 aa18.05■□□□□ 0.48
LRRC28-202ENST00000331450 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
LRRC28-202ENST00000331450 SNX17Q15036 470 aa18.05■□□□□ 0.48
LRRC28-202ENST00000331450 EPHA7Q15375 998 aa18.05■□□□□ 0.48
LRRC28-202ENST00000331450 UGCGQ16739 394 aa18.05■□□□□ 0.48
LRRC28-202ENST00000331450 TMEM266Q2M3C6 531 aa18.05■□□□□ 0.48
LRRC28-202ENST00000331450 FOXD4L6Q3SYB3 417 aaPredicted RBP18.05■□□□□ 0.48
LRRC28-202ENST00000331450 FOXD4L3Q6VB84 417 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms