RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 AGAP1Q9UPQ3 857 aa14□□□□□ -0.17
CCDC60-201ENST00000327554 AFF2P51816 1311 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 KLHL33A6NCF5 533 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 USP11P51784 963 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 INF2Q27J81 1249 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 FAM83BQ5T0W9 1011 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 MIS18BP1Q6P0N0 1132 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 SEC14L1Q92503 715 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 PBKQ96KB5 322 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 SPATS2LQ9NUQ6 558 aaKnown RBP13.99□□□□□ -0.17
CCDC60-201ENST00000327554 NOP53Q9NZM5 478 aaKnown RBP13.99□□□□□ -0.17
CCDC60-201ENST00000327554 PCDHA6Q9UN73 950 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 PCDHA8Q9Y5H6 950 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 CCDC194A0A1B0GVG4 234 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 CEP104O60308 925 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 CAND2O75155 1236 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 CHN1P15882 459 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 DHX9Q08211 1270 aaKnown RBP13.99□□□□□ -0.17
CCDC60-201ENST00000327554 SLMAPQ14BN4 828 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 GIGYF2Q6Y7W6 1299 aaKnown RBP13.99□□□□□ -0.17
CCDC60-201ENST00000327554 TXLNGYQ9BZA5 131 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 NUCKS1Q9H1E3 243 aaKnown RBP13.99□□□□□ -0.17
CCDC60-201ENST00000327554 ADAM7Q9H2U9 754 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 GOLPH3Q9H4A6 298 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 LRP2BPQ9P2M1 347 aa13.99□□□□□ -0.17
CCDC60-201ENST00000327554 CACNA1SQ13698 1873 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 ANKRD33BA6NCL7 494 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 ERVV-2B6SEH9 535 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 LAD1O00515 517 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 CDC25CP30307 473 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 MAP2K1Q02750 393 aaPredicted RBP13.98□□□□□ -0.17
CCDC60-201ENST00000327554 CAPRIN2Q6IMN6 1127 aaKnown RBP13.98□□□□□ -0.17
CCDC60-201ENST00000327554 TOM1L2Q6ZVM7 507 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 TRPM8Q7Z2W7 1104 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 LRRC34Q8IZ02 419 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 AK8Q96MA6 479 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 SH3GLB2Q9NR46 395 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 SLC5A4Q9NY91 659 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 NOC2LQ9Y3T9 749 aaKnown RBP13.98□□□□□ -0.17
CCDC60-201ENST00000327554 MAGEB6P1A0A0J9YX57 407 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 BTNL10A8MVZ5 291 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 PGRMC1O00264 195 aaKnown RBP13.98□□□□□ -0.17
CCDC60-201ENST00000327554 MMEP08473 750 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 ITGA4P13612 1032 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 BCAMP50895 628 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 SF3A3Q12874 501 aaKnown RBP eCLIP13.98□□□□□ -0.17
CCDC60-201ENST00000327554 LRRC57Q8N9N7 239 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 SH3GL3Q99963 347 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 RIOK1Q9BRS2 568 aaKnown RBP13.98□□□□□ -0.17
CCDC60-201ENST00000327554 AMACRQ9UHK6 382 aa13.98□□□□□ -0.17
CCDC60-201ENST00000327554 C1orf167Q5SNV9 1468 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 DIAPH2O60879 1101 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 PPFIA2O75334 1257 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 FGFR1OPO95684 399 aaKnown RBP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 NQO1P15559 274 aaKnown RBP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 PEX19P40855 299 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 MMP13P45452 471 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 KCNJ2P63252 427 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 EVX2Q03828 476 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 ADCY2Q08462 1091 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 FAM133BQ5BKY9 247 aaKnown RBP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 GUF1Q8N442 669 aaKnown RBP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 CNKSR1Q969H4 720 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 SAAL1Q96ER3 474 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 MMTAG2Q9BU76 263 aaKnown RBP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 MTFR1LQ9H019 292 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 EPB41L4BQ9H329 900 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 TCP11L1Q9NUJ3 509 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 ABCF3Q9NUQ8 709 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 ADAMTS1Q9UHI8 967 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 KIF13BQ9NQT8 1826 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 CCDC188H7C350 402 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 TTI1O43156 1089 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 ALDH5A1P51649 535 aaPredicted RBP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 EIF3BP55884 814 aaKnown RBP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 POLR2FP61218 127 aaKnown RBP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 NCALDP61601 193 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 AMPD3Q01432 767 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 LRRC63Q05C16 580 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 METTL13Q8N6R0 699 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 TANGO6Q9C0B7 1094 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 HOMER3Q9NSC5 361 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 CORO1CQ9ULV4 474 aaPredicted RBP13.97□□□□□ -0.17
CCDC60-201ENST00000327554 LAMB1P07942 1786 aa13.97□□□□□ -0.17
CCDC60-201ENST00000327554 NUP98P52948 1817 aa13.96□□□□□ -0.17
CCDC60-201ENST00000327554 PDE8AO60658 829 aa13.96□□□□□ -0.17
CCDC60-201ENST00000327554 RARAP10276 462 aa13.96□□□□□ -0.17
CCDC60-201ENST00000327554 CHRNA2Q15822 529 aa13.96□□□□□ -0.17
CCDC60-201ENST00000327554 ELAC2Q9BQ52 826 aaKnown RBP13.96□□□□□ -0.17
CCDC60-201ENST00000327554 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCDC60-201ENST00000327554 LSM14BQ9BX40 385 aaKnown RBP13.96□□□□□ -0.17
CCDC60-201ENST00000327554 SLITRK6Q9H5Y7 841 aa13.96□□□□□ -0.17
CCDC60-201ENST00000327554 MYMKA6NI61 221 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 KRIT1O00522 736 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 SHBGP04278 402 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 PCP11498 1178 aaKnown RBP13.96□□□□□ -0.18
CCDC60-201ENST00000327554 MKRN4PQ13434 485 aaPredicted RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms