RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 SEC24CP53992 1094 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 CLNS1AP54105 237 aaKnown RBP13.25□□□□□ -0.29
NLRC3-201ENST00000324659 SF3A3Q12874 501 aaKnown RBP eCLIP13.25□□□□□ -0.29
NLRC3-201ENST00000324659 ECM1Q16610 540 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 FAM83BQ5T0W9 1011 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 IFT20Q8IY31 132 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
NLRC3-201ENST00000324659 BCCIPQ9P287 314 aaKnown RBP eCLIP13.25□□□□□ -0.29
NLRC3-201ENST00000324659 PPP1R1BQ9UD71 204 aaPredicted RBP13.25□□□□□ -0.29
NLRC3-201ENST00000324659 CEP85LQ5SZL2 805 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 EMBQ6PCB8 327 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 LRRC55Q6ZSA7 311 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 TRMT1LQ7Z2T5 733 aaKnown RBP13.25□□□□□ -0.29
NLRC3-201ENST00000324659 OR2W6PQ8NHA6 318 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
NLRC3-201ENST00000324659 PHLPP1O60346 1717 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 DOT1LQ8TEK3 1739 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 TLR2O60603 784 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 IFT88Q13099 833 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 HGSNATQ68CP4 663 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 DPP8Q6V1X1 898 aaPredicted RBP13.25□□□□□ -0.29
NLRC3-201ENST00000324659 ZNF287Q9HBT7 754 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 LEMD3Q9Y2U8 911 aa13.25□□□□□ -0.29
NLRC3-201ENST00000324659 CNTNAP4Q9C0A0 1308 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 A0A087X0T9 212 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 ZNF233A6NK53 670 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 FGFR1OPO95684 399 aaKnown RBP13.24□□□□□ -0.29
NLRC3-201ENST00000324659 FAM228BP0C875 321 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 DDX42Q86XP3 938 aaKnown RBP eCLIP13.24□□□□□ -0.29
NLRC3-201ENST00000324659 MYOCDQ8IZQ8 938 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 RAD54LQ92698 747 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 MYH1P12882 1939 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 DLEC1Q9Y238 1755 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 ROBO1Q9Y6N7 1651 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 E9PMD0 336 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 KCNK3O14649 394 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 BACH1O14867 736 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 APBA3O96018 575 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 ACTN1P12814 892 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 HNRNPH3P31942 346 aaKnown RBP13.24□□□□□ -0.29
NLRC3-201ENST00000324659 SLC10A5Q5PT55 438 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 GUF1Q8N442 669 aaKnown RBP13.24□□□□□ -0.29
NLRC3-201ENST00000324659 CASKIN2Q8WXE0 1202 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 CCDC114Q96M63 670 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 AP1M1Q9BXS5 423 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 USP40Q9NVE5 1235 aa13.24□□□□□ -0.29
NLRC3-201ENST00000324659 ABCA3Q99758 1704 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 KRT18P05783 430 aaKnown RBP13.23□□□□□ -0.29
NLRC3-201ENST00000324659 PEX19P40855 299 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 KLHL30Q0D2K2 578 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 COASYQ13057 564 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 ZKSCAN4Q969J2 545 aaPredicted RBP13.23□□□□□ -0.29
NLRC3-201ENST00000324659 SH3GL2Q99962 352 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 PANK4Q9NVE7 773 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.23□□□□□ -0.29
NLRC3-201ENST00000324659 COL4A3BPQ9Y5P4 624 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 STRCQ7RTU9 1775 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 CHUKO15111 745 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 PAK2Q13177 524 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 PPANQ9NQ55 473 aaKnown RBP13.23□□□□□ -0.29
NLRC3-201ENST00000324659 TMCO5BA8MYB1 307 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 RAD51CO43502 376 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 PPP1R2P41236 205 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 ADCY7P51828 1080 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 FAM26FQ5R3K3 315 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 B4GALNT4Q76KP1 1039 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 MIEF2Q96C03 454 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 SPZ1Q9BXG8 430 aa13.23□□□□□ -0.29
NLRC3-201ENST00000324659 GBP2P32456 591 aaPredicted RBP13.22□□□□□ -0.29
NLRC3-201ENST00000324659 LRRC63Q05C16 580 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 HERC4Q5GLZ8 1057 aaPredicted RBP13.22□□□□□ -0.29
NLRC3-201ENST00000324659 ALS2CLQ60I27 953 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 POLLQ9UGP5 575 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 XIRP1Q702N8 1843 aaKnown RBP13.22□□□□□ -0.29
NLRC3-201ENST00000324659 PPP1R12BO60237 982 aaPredicted RBP13.22□□□□□ -0.29
NLRC3-201ENST00000324659 CEP104O60308 925 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 NOL4O94818 638 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 PRLRP16471 622 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 NR1D1P20393 614 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 SNAP25P60880 206 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 RC3H1Q5TC82 1133 aaKnown RBP13.22□□□□□ -0.29
NLRC3-201ENST00000324659 TAF4BQ92750 862 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 RAB34Q9BZG1 259 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 KLC4Q9NSK0 619 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 KIAA1024Q9UPX6 916 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 PLAAQ9Y263 795 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 GYS1P13807 737 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 TM4SF1P30408 202 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 FKBP3Q00688 224 aaKnown RBP13.22□□□□□ -0.29
NLRC3-201ENST00000324659 SF3B2Q13435 895 aaKnown RBP13.22□□□□□ -0.29
NLRC3-201ENST00000324659 ASTE1Q2TB18 679 aaPredicted RBP13.22□□□□□ -0.29
NLRC3-201ENST00000324659 KCTD1Q719H9 257 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 MTMR9Q96QG7 549 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 STK17AQ9UEE5 414 aa13.22□□□□□ -0.29
NLRC3-201ENST00000324659 PVALEFA0A1B0GWK0 134 aa13.21□□□□□ -0.29
NLRC3-201ENST00000324659 E7EVH7 732 aa13.21□□□□□ -0.29
NLRC3-201ENST00000324659 SERPING1P05155 500 aa13.21□□□□□ -0.29
NLRC3-201ENST00000324659 LSP1P33241 339 aa13.21□□□□□ -0.29
NLRC3-201ENST00000324659 SARNPP82979 210 aaKnown RBP13.21□□□□□ -0.29
NLRC3-201ENST00000324659 TCERG1LQ5VWI1 586 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms