RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CENPQQ7L2Z9 268 aaPredicted RBP7.97□□□□□ -1.13
CSTF3-201ENST00000323959 TTC6Q86TZ1 520 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 KATNAL1Q9BW62 490 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 CCDC86Q9H6F5 360 aaKnown RBP7.97□□□□□ -1.13
CSTF3-201ENST00000323959 EPS15L1Q9UBC2 864 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 PALD1Q9ULE6 856 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 PCDHGA5Q9Y5G8 931 aa7.97□□□□□ -1.13
CSTF3-201ENST00000323959 CSPG5O95196 566 aa7.96□□□□□ -1.13
CSTF3-201ENST00000323959 TOP3BO95985 862 aaKnown RBP7.96□□□□□ -1.13
CSTF3-201ENST00000323959 TMEM63BQ5T3F8 832 aa7.96□□□□□ -1.13
CSTF3-201ENST00000323959 RNF43Q68DV7 783 aa7.96□□□□□ -1.13
CSTF3-201ENST00000323959 TGFBRAP1Q8WUH2 860 aa7.96□□□□□ -1.13
CSTF3-201ENST00000323959 HNRNPLLQ8WVV9 542 aaKnown RBP7.96□□□□□ -1.13
CSTF3-201ENST00000323959 FOXQ1Q9C009 403 aa7.96□□□□□ -1.13
CSTF3-201ENST00000323959 PDGFCQ9NRA1 345 aa7.96□□□□□ -1.13
CSTF3-201ENST00000323959 PCDHB12Q9Y5F1 795 aa7.96□□□□□ -1.13
CSTF3-201ENST00000323959 CNOT1A5YKK6 2376 aaKnown RBP7.96□□□□□ -1.13
CSTF3-201ENST00000323959 NBEAQ8NFP9 2946 aa7.96□□□□□ -1.14
CSTF3-201ENST00000323959 ZBED4O75132 1171 aa7.96□□□□□ -1.14
CSTF3-201ENST00000323959 SHMT1P34896 483 aa7.96□□□□□ -1.14
CSTF3-201ENST00000323959 PHKA1P46020 1223 aa7.96□□□□□ -1.14
CSTF3-201ENST00000323959 FBXO16Q8IX29 292 aaPredicted RBP7.96□□□□□ -1.14
CSTF3-201ENST00000323959 EXOC6Q8TAG9 804 aa7.96□□□□□ -1.14
CSTF3-201ENST00000323959 KLK13Q9UKR3 277 aa7.96□□□□□ -1.14
CSTF3-201ENST00000323959 BCAR3O75815 825 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 ALDH1L1O75891 902 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 CSRP3P50461 194 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 CFHR1Q03591 330 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 MVPQ14764 893 aaKnown RBP7.95□□□□□ -1.14
CSTF3-201ENST00000323959 COLEC12Q5KU26 742 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 SCUBE3Q8IX30 993 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 SSH1Q8WYL5 1049 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 MYADMQ96S97 322 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 SLF1Q9BQI6 1058 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 WDR11Q9BZH6 1224 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 SALL2Q9Y467 1007 aaPredicted RBP7.95□□□□□ -1.14
CSTF3-201ENST00000323959 RARS2Q5T160 578 aaKnown RBP7.95□□□□□ -1.14
CSTF3-201ENST00000323959 SH3PXD2AQ5TCZ1 1133 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 LLGL2Q6P1M3 1020 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 SLC44A3Q8N4M1 653 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 GPR152Q8TDT2 470 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 RHOBTB2Q9BYZ6 727 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 FRYQ5TBA9 3013 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 CACNA1IQ9P0X4 2223 aa7.95□□□□□ -1.14
CSTF3-201ENST00000323959 SALL3Q9BXA9 1300 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 EYA2O00167 538 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 GIPC1O14908 333 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 FDX1P10109 184 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 SCAPQ12770 1279 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 RASGRF1Q13972 1273 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 LPAL2Q16609 132 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 BEND3Q5T5X7 828 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 CYP26C1Q6V0L0 522 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 ACAD9Q9H845 621 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 DDX19BQ9UMR2 479 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 MYO9AB2RTY4 2548 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.94□□□□□ -1.14
CSTF3-201ENST00000323959 HYAL3O43820 417 aaPredicted RBP7.94□□□□□ -1.14
CSTF3-201ENST00000323959 HDAC1Q13547 482 aaPredicted RBP7.94□□□□□ -1.14
CSTF3-201ENST00000323959 SF3A2Q15428 464 aaKnown RBP7.94□□□□□ -1.14
CSTF3-201ENST00000323959 TWISTNBQ3B726 338 aaPredicted RBP7.94□□□□□ -1.14
CSTF3-201ENST00000323959 NPAS4Q8IUM7 802 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 C7orf31Q8N865 590 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 ZFP91Q96JP5 570 aaPredicted RBP7.94□□□□□ -1.14
CSTF3-201ENST00000323959 API5Q9BZZ5 524 aaKnown RBP7.94□□□□□ -1.14
CSTF3-201ENST00000323959 RIPK3Q9Y572 518 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 CTDP1Q9Y5B0 961 aaPredicted RBP7.94□□□□□ -1.14
CSTF3-201ENST00000323959 PTPN13Q12923 2485 aa7.94□□□□□ -1.14
CSTF3-201ENST00000323959 A0A087WV48 116 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 FLIIQ13045 1269 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 FAM26DQ5JW98 314 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 PLA2G2CQ5R387 149 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 SERINC5Q86VE9 423 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 TSR2Q969E8 191 aaKnown RBP7.93□□□□□ -1.14
CSTF3-201ENST00000323959 CLUAP1Q96AJ1 413 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 GOPCQ9HD26 462 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 LTB4R2Q9NPC1 389 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 VPS45Q9NRW7 570 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 SAP30BPQ9UHR5 308 aaKnown RBP7.93□□□□□ -1.14
CSTF3-201ENST00000323959 PLCB3Q01970 1234 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 CNTN2Q02246 1040 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 MLF2Q15773 248 aaPredicted RBP7.93□□□□□ -1.14
CSTF3-201ENST00000323959 CCDC102BQ68D86 513 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 GPR149Q86SP6 731 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 WBP1Q96G27 269 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 CCDC136Q96JN2 1154 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 FBXO28Q9NVF7 368 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 PUF60Q9UHX1 559 aaKnown RBP7.93□□□□□ -1.14
CSTF3-201ENST00000323959 DDX41Q9UJV9 622 aaKnown RBP7.93□□□□□ -1.14
CSTF3-201ENST00000323959 MAFO75444 373 aaPredicted RBP7.93□□□□□ -1.14
CSTF3-201ENST00000323959 STAG3L1P0CL83 205 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 TRIM27P14373 513 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 PTGS1P23219 599 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 PSEN2P49810 448 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 PPP2R5BQ15173 497 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 C20orf194Q5TEA3 1177 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 FAM160A2Q8N612 972 aaPredicted RBP7.93□□□□□ -1.14
CSTF3-201ENST00000323959 SUCLG2Q96I99 432 aa7.93□□□□□ -1.14
CSTF3-201ENST00000323959 PURBQ96QR8 312 aaKnown RBP7.93□□□□□ -1.14
CSTF3-201ENST00000323959 C9orf78Q9NZ63 289 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms