RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SNAP25P60880 206 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 CEP170P1Q96L14 293 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 AP1M1Q9BXS5 423 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 MRPL47Q9HD33 250 aaKnown RBP11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 COX16Q9P0S2 106 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 PALLDQ8WX93 1383 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 IFNAR2P48551 515 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 CEP72Q9P209 647 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 LUC7L3O95232 432 aaKnown RBP11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 PSAPP07602 524 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 DGKHQ86XP1 1220 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 EXOC4Q96A65 974 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 TRIM56Q9BRZ2 755 aaKnown RBP11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 GDAQ9Y2T3 454 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 KIF3CO14782 793 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 OATP04181 439 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 CUL1Q13616 776 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 RPS6KA2Q15349 733 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 GSDMBQ8TAX9 411 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 GJB4Q9NTQ9 266 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 DDIT3P35638 169 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 RCAN1P53805 252 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 SESN3P58005 492 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 ARHGEF18Q6ZSZ5 1173 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 CYP2D6P10635 497 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 BAG6P46379 1132 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 OXER1Q8TDS5 423 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 SLC7A3Q8WY07 619 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 AKT3Q9Y243 479 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 MSH2P43246 934 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 FAM160B2Q86V87 743 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 KSR1Q8IVT5 923 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 Q9H521 79 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 IFT122Q9HBG6 1241 aa11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 SRP68Q9UHB9 627 aaKnown RBP11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 IPO11Q9UI26 975 aaKnown RBP11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.81□□□□□ -0.52
SNRNP200-201ENST00000323853 ECE1P42892 770 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 AP3B2Q13367 1082 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 TRIM42Q8IWZ5 723 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 GPR101Q96P66 508 aaPredicted RBP11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 JPH2Q9BR39 696 aaPredicted RBP11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 USH1CQ9Y6N9 552 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 CPDO75976 1380 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 TRIM49BA6NDI0 452 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 USP17L5A8MUK1 530 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 LGALS16A8MUM7 142 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 MCF2LO15068 1137 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 OSBPP22059 807 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 CYP27A1Q02318 531 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 RNASELQ05823 741 aaKnown RBP11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 DNAJC24Q6P3W2 148 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 SAT1P21673 171 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 IFRD2Q12894 506 aaPredicted RBP11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 CLEC17AQ6ZS10 378 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 ZBTB33Q86T24 672 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 KCTD6Q8NC69 237 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 ZMYND12Q9H0C1 365 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 SPC25Q9HBM1 224 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 EVI5O60447 810 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 CPP00450 1065 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 HOXA13P31271 388 aaPredicted RBP11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 SPOUT1Q5T280 376 aaKnown RBP11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 RNF207Q6ZRF8 634 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 RNF169Q8NCN4 708 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 CFAP61Q8NHU2 1237 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 CDC27P30260 824 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 FAM47CQ5HY64 1035 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 PPP1R18Q6NYC8 613 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 ARMC9Q7Z3E5 817 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 SRGAP2BP0DMP2 458 aa11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 TMED8Q6PL24 325 aaPredicted RBP11.8□□□□□ -0.52
SNRNP200-201ENST00000323853 PNPLA6Q8IY17 1366 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 ERCC6L2Q5T890 1561 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 OPHN1O60890 802 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 PALMO75781 387 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 KRT3P12035 628 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 EIF3BP55884 814 aaKnown RBP11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 ADCY1Q08828 1119 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 GRM4Q14833 912 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 GLE1Q53GS7 698 aaKnown RBP11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 DARS2Q6PI48 645 aaKnown RBP11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 COA1Q9GZY4 146 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 NOVA2Q9UNW9 492 aaKnown RBP11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 PXDNLA1KZ92 1463 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 HMGB1P1B2RPK0 211 aaPredicted RBP11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 NR1D1P20393 614 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 KCTD2Q14681 263 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 APOL6Q9BWW8 343 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 CYP27B1O15528 508 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 PNMA6AP0CW24 399 aaPredicted RBP11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 DYNLT1P63172 113 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 FOXO4P98177 505 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 TRIP13Q15645 432 aaPredicted RBP11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 OSBPL5Q9H0X9 879 aaPredicted RBP11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 UBN2Q6ZU65 1347 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 XPOTO43592 962 aaKnown RBP11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 MXI1P50539 228 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 KCNQ4P56696 695 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms