RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 LAMB4A4D0S4 1761 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 ZNF189O75820 626 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 SCG2P13521 617 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 NOP14P78316 857 aaKnown RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 SGO2Q562F6 1265 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 ADAT2Q7Z6V5 191 aaKnown RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 LRRC43Q8N309 656 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 NAV1Q8NEY1 1877 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 PABPN1LA6NDY0 278 aaKnown RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 KRT3P12035 628 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 MMEL1Q495T6 779 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 UNC5CLQ8IV45 518 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 SPATA4Q8NEY3 305 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 KIFC2Q96AC6 838 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 NUP98P52948 1817 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 ATAD5Q96QE3 1844 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 PSMD14O00487 310 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 ACADSP16219 412 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 EXOC3L4Q17RC7 722 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 ANO5Q75V66 913 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 ZCRB1Q8TBF4 217 aaKnown RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 CCT6BQ92526 530 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.61□□□□□ -1.194e-6■□□□□ 10.5
SMC1A-201ENST00000322213 TRIM15Q9C019 465 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 RASA4BC9J798 803 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 RASA4O43374 803 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 PLCG2P16885 1265 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 PREPLQ4J6C6 727 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 LMBR1LQ6UX01 489 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 MCF2L2Q86YR7 1114 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 HELBQ8NG08 1087 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 IPO5O00410 1097 aaKnown RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 AHCYL1O43865 530 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 TNNI2P48788 182 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 COPS2P61201 443 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 MFSD4BQ5TF39 518 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 EPC1Q9H2F5 836 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 ZFATQ9P243 1243 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 MCF2LO15068 1137 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 FBLN1P23142 703 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 POLR2FP61218 127 aaKnown RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 ROR2Q01974 943 aaKnown RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 CASC4Q6P4E1 433 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 OPTNQ96CV9 577 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 WDR19Q8NEZ3 1342 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 DKC1O60832 514 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 TAF5LO75529 589 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 ANXA1P04083 346 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 COPS6Q7L5N1 327 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 CYTH2Q99418 400 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 SOS2Q07890 1332 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 A0A1B0GTH6 734 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 FOXP2O15409 715 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 TPD52L2O43399 206 aaKnown RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 KRT75O95678 551 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 FGGP02679 453 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 NEK2P51955 445 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 BZW1Q7L1Q6 419 aaKnown RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 SESTD1Q86VW0 696 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 CRLF3Q8IUI8 442 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 ZNF483Q8TF39 744 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 SH3BP1Q9Y3L3 701 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 DENND4BO75064 1496 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 ABCC3O15438 1527 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 C21orf2O43822 256 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 MBD4O95243 580 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 KRT14P02533 472 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 RSRC2Q7L4I2 434 aaKnown RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 TRIML2Q8N7C3 387 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 SYT2Q8N9I0 419 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 SLITRK6Q9H5Y7 841 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 IFT122Q9HBG6 1241 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 ANLNQ9NQW6 1124 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 PANK4Q9NVE7 773 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 RHBDL2Q9NX52 303 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 ANAPC5Q9UJX4 755 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 TRIM33Q9UPN9 1127 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 ATP1A1P05023 1023 aaKnown RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 PLS3P13797 630 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 EEF1B2P24534 225 aaKnown RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 PTGISQ16647 500 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 P2RX5Q93086 422 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 ATG3Q9NT62 314 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 TBC1D7Q9P0N9 293 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 SEPT3Q9UH03 358 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 PLEKHG1Q9ULL1 1385 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 NEURL4Q96JN8 1562 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 LIN7AO14910 233 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 STRNO43815 780 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 PCP11498 1178 aaKnown RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 TMCO4Q5TGY1 634 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 CABP7Q86V35 215 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 SNX29Q8TEQ0 813 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 KIFC3Q9BVG8 833 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 MRPL40Q9NQ50 206 aaKnown RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 SNX12Q9UMY4 172 aa7.6□□□□□ -1.19
SMC1A-201ENST00000322213 V9GY48 417 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 MDM2Q00987 491 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 YTHDF3Q7Z739 585 aaKnown RBP7.6□□□□□ -1.19
SMC1A-201ENST00000322213 ZNF654Q8IZM8 581 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms