RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 THOC1Q96FV9 657 aaKnown RBP16.65■□□□□ 0.26
VARS2-201ENST00000321897 COL4A3BPQ9Y5P4 624 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 CALUO43852 315 aaPredicted RBP16.65■□□□□ 0.26
VARS2-201ENST00000321897 FLOT1O75955 427 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 SEC23AQ15436 765 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 VWA3BQ502W6 1294 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 HPCAL4Q9UM19 191 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 K7ENM7 598 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 C21orf2O43822 256 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 MYO1EQ12965 1108 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 CCDC93Q567U6 631 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 MS4A14Q96JA4 679 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 ANO3Q9BYT9 981 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 PSD3Q9NYI0 1048 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 STIM2Q9P246 746 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 ATP8A1Q9Y2Q0 1164 aa16.65■□□□□ 0.26
VARS2-201ENST00000321897 MST1RQ04912 1400 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 GRM4Q14833 912 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 FAM102BQ5T8I3 360 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 PRR5LQ6MZQ0 368 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 DNAJC17Q9NVM6 304 aaKnown RBP16.64■□□□□ 0.25
VARS2-201ENST00000321897 GGT7Q9UJ14 662 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 CCDC160A6NGH7 325 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 POTEJP0CG39 1038 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 APBA1Q02410 837 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 SF3B3Q15393 1217 aaKnown RBP16.64■□□□□ 0.25
VARS2-201ENST00000321897 QRICH1Q2TAL8 776 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 ASPRV1Q53RT3 343 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 CCDC26Q8TAB7 109 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 PTPN22Q9Y2R2 807 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 BBOX1O75936 387 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 ZBTB16Q05516 673 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 FBXO33Q7Z6M2 555 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 FAM167BQ9BTA0 163 aa16.64■□□□□ 0.25
VARS2-201ENST00000321897 UTP11Q9Y3A2 253 aaKnown RBP16.64■□□□□ 0.25
VARS2-201ENST00000321897 PPP1R2P41236 205 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 ATP11AP98196 1134 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 AP1ARQ63HQ0 302 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 GALNT17Q6IS24 598 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 INTS8Q75QN2 995 aaKnown RBP16.63■□□□□ 0.25
VARS2-201ENST00000321897 SFR1Q86XK3 245 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 SYNCQ9H7C4 482 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 MYMKA6NI61 221 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 ABL1P00519 1130 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 ACTN1P12814 892 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 ERVK-24P63145 666 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 BIRC2Q13490 618 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 LMBR1Q8WVP7 490 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 ORC4O43929 436 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 CHRNA5P30532 468 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 MESDQ14696 234 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 AK8Q96MA6 479 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 TRIM6Q9C030 488 aaPredicted RBP16.63■□□□□ 0.25
VARS2-201ENST00000321897 CHORDC1Q9UHD1 332 aaPredicted RBP16.63■□□□□ 0.25
VARS2-201ENST00000321897 DAGLAQ9Y4D2 1042 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 FLT1P17948 1338 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 SPATA31A1Q5TZJ5 1347 aa16.63■□□□□ 0.25
VARS2-201ENST00000321897 RGS16O15492 202 aaPredicted RBP16.62■□□□□ 0.25
VARS2-201ENST00000321897 H2AFZP0C0S5 128 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 ALDH1B1P30837 517 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 GPATCH4Q5T3I0 446 aaKnown RBP16.62■□□□□ 0.25
VARS2-201ENST00000321897 H2AFVQ71UI9 128 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 RSRC2Q7L4I2 434 aaKnown RBP16.62■□□□□ 0.25
VARS2-201ENST00000321897 MIER3Q7Z3K6 550 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 NFIAQ12857 509 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 PPP4R3AQ6IN85 833 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 CCDC105Q8IYK2 499 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 YIPF3Q9GZM5 350 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 KLC4Q9NSK0 619 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 GCNT4Q9P109 453 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 TPX2Q9ULW0 747 aaKnown RBP16.62■□□□□ 0.25
VARS2-201ENST00000321897 PLAAQ9Y263 795 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 ZNF746Q6NUN9 644 aaPredicted RBP16.62■□□□□ 0.25
VARS2-201ENST00000321897 ADSSL1Q8N142 457 aa16.62■□□□□ 0.25
VARS2-201ENST00000321897 PNMA6FA0A0J9YX94 578 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 PALMO75781 387 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 EIF2AK2P19525 551 aaKnown RBP16.61■□□□□ 0.25
VARS2-201ENST00000321897 CETN2P41208 172 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 EZH2Q15910 746 aaKnown RBP16.61■□□□□ 0.25
VARS2-201ENST00000321897 XKR9Q5GH70 373 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 FNBP1Q96RU3 617 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 THAP9Q9H5L6 903 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 INTS13Q9NVM9 706 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 ASIC3Q9UHC3 531 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 TULP2O00295 520 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 BMP3P12645 472 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 AOC3Q16853 763 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 EEPD1Q7L9B9 569 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 ZNF512BQ96KM6 892 aaPredicted RBP16.61■□□□□ 0.25
VARS2-201ENST00000321897 LACRTQ9GZZ8 138 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 SWAP70Q9UH65 585 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 RGPD8O14715 1765 aaPredicted RBP16.61■□□□□ 0.25
VARS2-201ENST00000321897 SLC37A4O43826 429 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 SKAP2O75563 359 aaPredicted RBP16.61■□□□□ 0.25
VARS2-201ENST00000321897 TRIM49P0CI25 452 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 TRIM49CP0CI26 452 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 SLC8A1P32418 973 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 CRKP46108 304 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 COASYQ13057 564 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms