RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 MAB21L3Q8N8X9 362 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 SH3TC2Q8TF17 1288 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 HELLSQ9NRZ9 838 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 DNM1LO00429 736 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 TUBBP07437 444 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 PYGBP11216 843 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 GNAT2P19087 354 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 VCAM1P19320 739 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 CDC27P30260 824 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 GNPTABQ3T906 1256 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 TATDN1Q6P1N9 297 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 CCDC121Q6ZUS5 278 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 C16orf86Q6ZW13 317 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 HOMER2Q9NSB8 354 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 TRIM10Q9UDY6 481 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 A0A0G2JLL6 359 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-201ENST00000318023 GOLGA6L7A0A1B0GV03 622 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 CXCL11O14625 94 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 LAMB3Q13751 1172 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 SPECC1Q5M775 1068 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 MIS18BP1Q6P0N0 1132 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 KCTD1Q719H9 257 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 FASTKD5Q7L8L6 764 aaKnown RBP10.35□□□□□ -0.75
CAPN3-201ENST00000318023 PRRT2Q7Z6L0 340 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-201ENST00000318023 RNPC3Q96LT9 517 aaKnown RBP10.35□□□□□ -0.75
CAPN3-201ENST00000318023 NCOA5Q9HCD5 579 aaKnown RBP10.35□□□□□ -0.75
CAPN3-201ENST00000318023 TXNRD2Q9NNW7 524 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 PCDH10Q9P2E7 1040 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 L3MBTL1Q9Y468 752 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 TLR2O60603 784 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 NPM3O75607 178 aaKnown RBP10.35□□□□□ -0.75
CAPN3-201ENST00000318023 GOLGA8HP0CJ92 632 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 SLC8A1P32418 973 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 MOGSQ13724 837 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 NOL9Q5SY16 702 aaKnown RBP10.35□□□□□ -0.75
CAPN3-201ENST00000318023 MFSD6Q6ZSS7 791 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 Q6ZUG5 572 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 TMEM179Q6ZVK1 233 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 SIAH1Q8IUQ4 282 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 KCNH4Q9UQ05 1017 aa10.35□□□□□ -0.75
CAPN3-201ENST00000318023 FRMPD2Q68DX3 1309 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-201ENST00000318023 LAMA2P24043 3122 aaKnown RBP10.35□□□□□ -0.75
CAPN3-201ENST00000318023 PTPDC1A2A3K4 754 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 BACH1O14867 736 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 KRT14P02533 472 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 PFKFB1P16118 471 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 CTGFP29279 349 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 SLC16A2P36021 539 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 CCDC96Q2M329 555 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 CCT8L2Q96SF2 557 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 NUP58Q9BVL2 599 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 A0A1B0GVG6 124 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 AKR1B15C9JRZ8 316 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-201ENST00000318023 E7EVH7 732 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 ALDH1A1P00352 501 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 ELNP15502 786 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 MARCKSP29966 332 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-201ENST00000318023 TUBB4BP68371 445 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 MAP3K10Q02779 954 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 PLCB4Q15147 1175 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 Q3C1V9 767 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 YTHDF3Q7Z739 585 aaKnown RBP10.34□□□□□ -0.75
CAPN3-201ENST00000318023 SPATS2Q86XZ4 545 aaKnown RBP10.34□□□□□ -0.75
CAPN3-201ENST00000318023 B4GALNT2Q8NHY0 566 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 EZH1Q92800 747 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-201ENST00000318023 MAP4K1Q92918 833 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 SPAG5Q96R06 1193 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 RUFY1Q96T51 708 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 PARK7Q99497 189 aaKnown RBP10.34□□□□□ -0.75
CAPN3-201ENST00000318023 ARHGEF10LQ9HCE6 1279 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 AGTPBP1Q9UPW5 1226 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 TNPO2O14787 897 aaKnown RBP10.34□□□□□ -0.75
CAPN3-201ENST00000318023 PRPHP41219 470 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 AMPD2Q01433 879 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 MYCBPAPQ8TBZ2 947 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 OSBPL7Q9BZF2 842 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 EPN3Q9H201 632 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 TMEM165Q9HC07 324 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 GPCPD1Q9NPB8 672 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 GPHNQ9NQX3 736 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-201ENST00000318023 GUCA1BQ9UMX6 200 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 TFR2Q9UP52 801 aa10.34□□□□□ -0.75
CAPN3-201ENST00000318023 GOLGA8KD6RF30 607 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 TEX33O43247 280 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 LGR5O75473 907 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 SMNDC1O75940 238 aaKnown RBP eCLIP10.33□□□□□ -0.76
CAPN3-201ENST00000318023 RTN3O95197 1032 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-201ENST00000318023 CYP2B6P20813 491 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 RBL2Q08999 1139 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 CCDC50Q8IVM0 306 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 TSEN2Q8NCE0 465 aaKnown RBP10.33□□□□□ -0.76
CAPN3-201ENST00000318023 LINC00301Q8NCQ3 95 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 ATG4CQ96DT6 458 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 FAM167BQ9BTA0 163 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 PORCNQ9H237 461 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 NOD2Q9HC29 1040 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 VAT1LQ9HCJ6 419 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 PPANQ9NQ55 473 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms