RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 PACSIN1Q9BY11 444 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 INPP5BP32019 993 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 GUCY1A3Q02108 690 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 NFIAQ12857 509 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 PAK2Q13177 524 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 TRADDQ15628 312 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 CEP85LQ5SZL2 805 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 ZSCAN29Q8IWY8 852 aaPredicted RBP16.38■□□□□ 0.21
TFE3-201ENST00000315869 ZFPM1Q8IX07 1006 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 RAD54LQ92698 747 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 CRAMP1Q96RY5 1269 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 SPZ1Q9BXG8 430 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 STK17AQ9UEE5 414 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 DDX25Q9UHL0 483 aaKnown RBP16.38■□□□□ 0.21
TFE3-201ENST00000315869 C21orf2O43822 256 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 HOXA10P31260 410 aaPredicted RBP16.38■□□□□ 0.21
TFE3-201ENST00000315869 SLC20A2Q08357 652 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 COASYQ13057 564 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 AOC3Q16853 763 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 GPBP1Q86WP2 473 aa16.38■□□□□ 0.21
TFE3-201ENST00000315869 RPS6KA5O75582 802 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 MNAT1P51948 309 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 LRRC63Q05C16 580 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 PRPF4BQ13523 1007 aaKnown RBP16.37■□□□□ 0.21
TFE3-201ENST00000315869 ASIC2Q16515 512 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 KLHDC7AQ5VTJ3 777 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 EMBQ6PCB8 327 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 SP8Q8IXZ3 490 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 TRIM31Q9BZY9 425 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 USP40Q9NVE5 1235 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 NPR1P16066 1061 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 ADAM9Q13443 819 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 FIGNQ5HY92 759 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 KCTD1Q719H9 257 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 EFCAB13Q8IY85 973 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 OTUD6BQ8N6M0 293 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 AP1M1Q9BXS5 423 aa16.37■□□□□ 0.21
TFE3-201ENST00000315869 SEPT11Q9NVA2 429 aaKnown RBP16.37■□□□□ 0.21
TFE3-201ENST00000315869 RGL2O15211 777 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 ATP2C2O75185 946 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 ACTN1P12814 892 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 RHBDL3P58872 404 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 TTBK2Q6IQ55 1244 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 PURBQ96QR8 312 aaKnown RBP16.36■□□□□ 0.21
TFE3-201ENST00000315869 PPANQ9NQ55 473 aaKnown RBP16.36■□□□□ 0.21
TFE3-201ENST00000315869 COL24A1Q17RW2 1714 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 A0A087WUV0 522 aaPredicted RBP16.36■□□□□ 0.21
TFE3-201ENST00000315869 A0A087X0T9 212 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 PVALEFA0A1B0GWK0 134 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 MEIS1O00470 390 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 PLSCR1O15162 318 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 FAM228BP0C875 321 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 IL1R1P14778 569 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 ZC3H4Q9UPT8 1303 aaKnown RBP16.36■□□□□ 0.21
TFE3-201ENST00000315869 RPS6KA1Q15418 735 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 FBXW10Q5XX13 1052 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 CCDC65Q8IXS2 484 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 NEDD1Q8NHV4 660 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 BAP1Q92560 729 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 A0A1B0GUL6 1792 aa16.36■□□□□ 0.21
TFE3-201ENST00000315869 POTEB3A0JP26 581 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 POTECB2RU33 542 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 H0YIN7 160 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 EIF3HO15372 352 aaKnown RBP eCLIP16.35■□□□□ 0.21
TFE3-201ENST00000315869 CDK17Q00537 523 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 TTMPQ5BVD1 217 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 POTEBQ6S5H4 581 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 FGFBP2Q9BYJ0 223 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 LRRC27Q9C0I9 530 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 CAPN7Q9Y6W3 813 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 USP17L15C9J2P7 530 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 USP17L13C9JLJ4 530 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 USP17L11C9JVI0 530 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 USP17L18D6R9N7 530 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 USP17L22D6RA61 530 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 USP17L17D6RBQ6 530 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 USP17L19D6RCP7 530 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 USP17L20D6RJB6 530 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 STAT3P40763 770 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 USP17L24Q0WX57 530 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 KCNMA1Q12791 1236 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 USP17L6PQ6QN14 398 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 ADAT2Q7Z6V5 191 aaKnown RBP16.35■□□□□ 0.21
TFE3-201ENST00000315869 DDX42Q86XP3 938 aaKnown RBP eCLIP16.35■□□□□ 0.21
TFE3-201ENST00000315869 IQCDQ96DY2 449 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 SERPING1P05155 500 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 PDE6BP35913 854 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 SEC24CP53992 1094 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 NAA35Q5VZE5 725 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
TFE3-201ENST00000315869 CETN3O15182 167 aa16.34■□□□□ 0.21
TFE3-201ENST00000315869 TNNC1P63316 161 aa16.34■□□□□ 0.21
TFE3-201ENST00000315869 ECM1Q16610 540 aa16.34■□□□□ 0.21
TFE3-201ENST00000315869 ZNF662Q6ZS27 426 aa16.34■□□□□ 0.21
TFE3-201ENST00000315869 LRRC55Q6ZSA7 311 aa16.34■□□□□ 0.21
TFE3-201ENST00000315869 OR2W6PQ8NHA6 318 aa16.34■□□□□ 0.21
TFE3-201ENST00000315869 UBLCP1Q8WVY7 318 aaPredicted RBP16.34■□□□□ 0.21
TFE3-201ENST00000315869 RIC8AQ9NPQ8 531 aa16.34■□□□□ 0.21
TFE3-201ENST00000315869 PCNTO95613 3336 aa16.34■□□□□ 0.21
TFE3-201ENST00000315869 GPR75-ASB3A0A0A6YYF3 556 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms