RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 LUC7L2Q9Y383 392 aaKnown RBP12.77□□□□□ -0.37
LDLRAD3-201ENST00000315571 COBLO75128 1261 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 CTNNA1P35221 906 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 KRT71Q3SY84 523 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 MAGEC3Q8TD91 643 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 MAP4K1Q92918 833 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 OPTNQ96CV9 577 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 PANX2Q96RD6 677 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 ELAC2Q9BQ52 826 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 RIOK1Q9BRS2 568 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 PANK4Q9NVE7 773 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 DMGDHQ9UI17 866 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 FLOT1O75955 427 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 USP17L8P0C7I0 530 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 IFNAR2P48551 515 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 ZBED6P86452 979 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 KLC1Q07866 573 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 EMBQ6PCB8 327 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 NAPBQ9H115 298 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 CHMP2BQ9UQN3 213 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 DOCK2Q92608 1830 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 CHD4Q14839 1912 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 DYTNA2CJ06 578 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 TARSL2A2RTX5 802 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 PRKAB2O43741 272 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 USO1O60763 962 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 GALNT17Q6IS24 598 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 HHIPL2Q6UWX4 724 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 OLFML1Q6UWY5 402 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 GALNT15Q8N3T1 639 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 FAM163AQ96GL9 167 aaPredicted RBP12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 ATP6V1G3Q96LB4 118 aa12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 DDX23Q9BUQ8 820 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 TSPYL2Q9H2G4 693 aaPredicted RBP12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 NOVA2Q9UNW9 492 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-201ENST00000315571 GPR75-ASB3A0A0A6YYF3 556 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 TACC1O75410 805 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 FAM200BP0CF97 657 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 CCND1P24385 295 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 GJA8P48165 433 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 SERPINB4P48594 390 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 KRT83P78385 493 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 SKOR1P84550 965 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 BLMHQ13867 455 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 SH2D4BQ5SQS7 431 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 RBM12BQ8IXT5 1001 aaKnown RBP12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 INTUQ9ULD6 942 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 PCDHGA4Q9Y5G9 962 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 GAKO14976 1311 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 SRCAPQ6ZRS2 3230 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 GOLGB1Q14789 3259 aaKnown RBP12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 ZSCAN9O15535 394 aaPredicted RBP12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 LINGO3P0C6S8 592 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 RPS12P25398 132 aaKnown RBP12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 RFC5P40937 340 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 RAD23BP54727 409 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 MRPS35P82673 323 aaKnown RBP12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 ANO1Q5XXA6 986 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 FAM47EQ6ZV65 393 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 SDR42E1Q8WUS8 393 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 HAUS4Q9H6D7 363 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 SERPINA10Q9UK55 444 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 ZNF541Q9H0D2 1346 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 A0A1W2PQ27 194 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 A0A1W2PQ64 194 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 A0A1W2PQD8 194 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 HMGB1P1B2RPK0 211 aaPredicted RBP12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 KDM7AQ6ZMT4 941 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 TMEM110Q86TL2 294 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 TMEM139Q8IV31 216 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 SPICE1Q8N0Z3 855 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 TSEN2Q8NCE0 465 aaKnown RBP12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 LINC00301Q8NCQ3 95 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 SH3RF3Q8TEJ3 882 aaPredicted RBP12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 HDAC7Q8WUI4 952 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 CTAGE1Q96RT6 745 aa12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 LBHD1Q9BQE6 289 aaPredicted RBP12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 NSRP1Q9H0G5 558 aaKnown RBP12.75□□□□□ -0.37
LDLRAD3-201ENST00000315571 SCN9AQ15858 1988 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 MYO5AQ9Y4I1 1855 aaKnown RBP12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 SPDYE5A6NIY4 337 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 CYLC1P35663 651 aaPredicted RBP12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 GMPSP49915 693 aaPredicted RBP12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 PPP4CP60510 307 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 CUL4BQ13620 913 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 DLGAP5Q15398 846 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 DNAJC14Q6Y2X3 702 aaPredicted RBP12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 RUFY4Q6ZNE9 571 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 CACNA2D4Q7Z3S7 1137 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 ZNF570Q96NI8 536 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 UBAC1Q9BSL1 405 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.74□□□□□ -0.372e-6■■■■■ 161.5
LDLRAD3-201ENST00000315571 UBAP1Q9NZ09 502 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 MYH7P12883 1935 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 SFSWAPQ12872 951 aaKnown RBP12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 OLFML2BQ68BL8 750 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 ERICH1Q86X53 443 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 ELOA2Q8IYF1 753 aaPredicted RBP12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 IFNL3Q8IZI9 196 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms