RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 NKRFO15226 690 aaKnown RBP eCLIP8.93□□□□□ -0.987e-7■□□□□ 10.1
CDC42-201ENST00000315554 ZNF286BP0CG31 522 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 KCNA2P16389 499 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 ICAM3P32942 547 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 ACLYP53396 1101 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 PSMC6P62333 389 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 ITGB3BPQ13352 177 aaPredicted RBP8.93□□□□□ -0.98
CDC42-201ENST00000315554 HSDL1Q3SXM5 330 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 CELF3Q5SZQ8 465 aaKnown RBP8.93□□□□□ -0.98
CDC42-201ENST00000315554 MYSM1Q5VVJ2 828 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 LARP1BQ659C4 914 aaKnown RBP8.93□□□□□ -0.98
CDC42-201ENST00000315554 MCTP2Q6DN12 878 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 CCSAPQ6IQ19 270 aaPredicted RBP8.93□□□□□ -0.98
CDC42-201ENST00000315554 THSD4Q6ZMP0 1018 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 NECAB2Q7Z6G3 386 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 UBE2Q1Q7Z7E8 422 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 TEX2Q8IWB9 1127 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 ANKLE1Q8NAG6 615 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 TMC2Q8TDI7 906 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 VTI1AQ96AJ9 217 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 SPATA33Q96N06 139 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 AGO4Q9HCK5 861 aaKnown RBP8.93□□□□□ -0.98
CDC42-201ENST00000315554 VPS9D1Q9Y2B5 631 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 Q9Y3F1 56 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 KIF3AQ9Y496 699 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 MYH7BA7E2Y1 1941 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 KIAA1217Q5T5P2 1943 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 A0A1W2PQ45 241 aaPredicted RBP8.92□□□□□ -0.98
CDC42-201ENST00000315554 A0A1W2PQY0 241 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 SLC37A4O43826 429 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 CCNT1O60563 726 aaKnown RBP8.92□□□□□ -0.98
CDC42-201ENST00000315554 HSP90AA1P07900 732 aaKnown RBP8.92□□□□□ -0.98
CDC42-201ENST00000315554 MMP3P08254 477 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 COL6A1P12109 1028 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 CIITAP33076 1130 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 CPT1AP50416 773 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 LAMC2Q13753 1193 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 NEDD9Q14511 834 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 UTP14CQ5TAP6 766 aaKnown RBP8.92□□□□□ -0.98
CDC42-201ENST00000315554 KCNV1Q6PIU1 500 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 Q6ZNB5 142 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 NEK8Q86SG6 692 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 FERMT3Q86UX7 667 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 LENG9Q96B70 501 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 ZNF577Q9BSK1 485 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 PHF24Q9UPV7 400 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 DOCK5Q9H7D0 1870 aa8.92□□□□□ -0.98
CDC42-201ENST00000315554 A6NJR5 290 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 NOP56O00567 594 aaKnown RBP8.91□□□□□ -0.98
CDC42-201ENST00000315554 MSH4O15457 936 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 ZEB2O60315 1214 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 TGFB3P10600 412 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 CST5P28325 142 aaPredicted RBP8.91□□□□□ -0.98
CDC42-201ENST00000315554 USP11P51784 963 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 LRRC26Q2I0M4 334 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 FOXD4L5Q5VV16 416 aaPredicted RBP8.91□□□□□ -0.98
CDC42-201ENST00000315554 METTL7BQ6UX53 244 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 TRIM50Q86XT4 487 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 NOSTRINQ8IVI9 506 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 PCSK9Q8NBP7 692 aaKnown RBP8.91□□□□□ -0.98
CDC42-201ENST00000315554 FOXD4L4Q8WXT5 416 aaPredicted RBP8.91□□□□□ -0.98
CDC42-201ENST00000315554 CDHR1Q96JP9 859 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 GPR20Q99678 358 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 SDF4Q9BRK5 362 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 STARD7Q9NQZ5 370 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 DDX25Q9UHL0 483 aaKnown RBP8.91□□□□□ -0.98
CDC42-201ENST00000315554 BRCA2P51587 3418 aa8.91□□□□□ -0.98
CDC42-201ENST00000315554 MOXD2PA6NHM9 499 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 IPO5O00410 1097 aaKnown RBP8.9□□□□□ -0.98
CDC42-201ENST00000315554 DHX15O43143 795 aaKnown RBP8.9□□□□□ -0.98
CDC42-201ENST00000315554 CHMP2AO43633 222 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 CCNE2O96020 404 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 SYT1P21579 422 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 NKX3-2P78367 333 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 PURAQ00577 322 aaKnown RBP8.9□□□□□ -0.98
CDC42-201ENST00000315554 SETQ01105 290 aaPredicted RBP8.9□□□□□ -0.98
CDC42-201ENST00000315554 ZNF174Q15697 407 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 TRIM60Q495X7 471 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 BRDTQ58F21 947 aaPredicted RBP8.9□□□□□ -0.98
CDC42-201ENST00000315554 NIPA1Q7RTP0 329 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 PPTC7Q8NI37 304 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 DPF3Q92784 378 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 INTS4Q96HW7 963 aaKnown RBP8.9□□□□□ -0.98
CDC42-201ENST00000315554 PKNOX2Q96KN3 472 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 GLT1D1Q96MS3 346 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 SENP7Q9BQF6 1050 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 TSEN34Q9BSV6 310 aaKnown RBP8.9□□□□□ -0.98
CDC42-201ENST00000315554 MFRPQ9BY79 579 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 FOXP1Q9H334 677 aaPredicted RBP8.9□□□□□ -0.98
CDC42-201ENST00000315554 JPH1Q9HDC5 661 aaPredicted RBP8.9□□□□□ -0.98
CDC42-201ENST00000315554 SLC9A2Q9UBY0 812 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 ATP11BQ9Y2G3 1177 aa8.9□□□□□ -0.98
CDC42-201ENST00000315554 CYP3A7-CYP3A51PA0A087WV96 503 aa8.89□□□□□ -0.99
CDC42-201ENST00000315554 GSTTP1A0A1W2PQM5 241 aa8.89□□□□□ -0.99
CDC42-201ENST00000315554 RBAK-RBAKDNI3L0D1 243 aa8.89□□□□□ -0.99
CDC42-201ENST00000315554 MARCH6O60337 910 aa8.89□□□□□ -0.99
CDC42-201ENST00000315554 PQBP1O60828 265 aaKnown RBP8.89□□□□□ -0.99
CDC42-201ENST00000315554 LGALS2P05162 132 aa8.89□□□□□ -0.99
CDC42-201ENST00000315554 CYP3A7P24462 503 aa8.89□□□□□ -0.99
CDC42-201ENST00000315554 U2AF2P26368 475 aaKnown RBP eCLIP8.89□□□□□ -0.993e-11■□□□□ 10.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms