RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 C16orf86Q6ZW13 317 aa14.76□□□□□ -0.05
SKA3-202ENST00000314759 MAATS1Q7Z4T9 603 aa14.76□□□□□ -0.05
SKA3-202ENST00000314759 CCDC13Q8IYE1 715 aa14.76□□□□□ -0.05
SKA3-202ENST00000314759 CENPHQ9H3R5 247 aa14.76□□□□□ -0.05
SKA3-202ENST00000314759 TAF1DQ9H5J8 278 aaPredicted RBP14.76□□□□□ -0.05
SKA3-202ENST00000314759 RIOX1Q9H6W3 641 aa14.76□□□□□ -0.05
SKA3-202ENST00000314759 ZNF287Q9HBT7 754 aa14.76□□□□□ -0.05
SKA3-202ENST00000314759 KLC4Q9NSK0 619 aa14.76□□□□□ -0.05
SKA3-202ENST00000314759 PANK4Q9NVE7 773 aa14.76□□□□□ -0.05
SKA3-202ENST00000314759 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.76□□□□□ -0.05
SKA3-202ENST00000314759 ECHS1P30084 290 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 ERVK-9P63128 1117 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 SPRED3Q2MJR0 410 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 NELFCDQ8IXH7 590 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 LINC00116Q8NCU8 138 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 VCPKMTQ9H867 229 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 A1CFQ9NQ94 594 aaKnown RBP14.75□□□□□ -0.05
SKA3-202ENST00000314759 FRMPD2Q68DX3 1309 aaPredicted RBP14.75□□□□□ -0.05
SKA3-202ENST00000314759 KCNK3O14649 394 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 KCNQ2O43526 872 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 HOXA7P31268 230 aaPredicted RBP14.75□□□□□ -0.05
SKA3-202ENST00000314759 TNNC1P63316 161 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 YTHDF3Q7Z739 585 aaKnown RBP14.75□□□□□ -0.05
SKA3-202ENST00000314759 FAM212AQ96EL1 285 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 CEP63Q96MT8 703 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 TMBIM4Q9HC24 238 aa14.75□□□□□ -0.05
SKA3-202ENST00000314759 E7EVH7 732 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 ADCY7P51828 1080 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 GSTO1P78417 241 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 HAS1Q92839 578 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 ISCUQ9H1K1 167 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 GOLPH3Q9H4A6 298 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 PPANQ9NQ55 473 aaKnown RBP14.74□□□□□ -0.05
SKA3-202ENST00000314759 STRCQ7RTU9 1775 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 COL14A1Q05707 1796 aaKnown RBP14.74□□□□□ -0.05
SKA3-202ENST00000314759 RASSF9O75901 435 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 TM4SF1P30408 202 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 HPDP32754 393 aaPredicted RBP14.74□□□□□ -0.05
SKA3-202ENST00000314759 HSD17B3P37058 310 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 MARSP56192 900 aaKnown RBP14.74□□□□□ -0.05
SKA3-202ENST00000314759 HLTFQ14527 1009 aaKnown RBP eCLIP14.74□□□□□ -0.05
SKA3-202ENST00000314759 RPS6KA1Q15418 735 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 AEBP2Q6ZN18 517 aaPredicted RBP14.74□□□□□ -0.05
SKA3-202ENST00000314759 RTFDC1Q9BY42 306 aaPredicted RBP14.74□□□□□ -0.05
SKA3-202ENST00000314759 GANQ9H2C0 597 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 PLCB1Q9NQ66 1216 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 PCDHA2Q9Y5H9 948 aa14.74□□□□□ -0.05
SKA3-202ENST00000314759 H0YGN5 161 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 CHUKO15111 745 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 FAM107AO95990 144 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 SSBP05455 408 aaKnown RBP eCLIP14.73□□□□□ -0.05
SKA3-202ENST00000314759 PDHBP11177 359 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 SCP2P22307 547 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 ASIC2Q16515 512 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 MICALCLQ6ZW33 695 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 OR2W6PQ8NHA6 318 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 SCFD2Q8WU76 684 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 TAF4BQ92750 862 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 SLC40A1Q9NP59 571 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 NFS1Q9Y697 457 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 GNA14O95837 355 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 TNNI2P48788 182 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 SMTNP53814 917 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 PTK2Q05397 1052 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 SEPT2Q15019 361 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 UAP1Q16222 522 aaPredicted RBP14.73□□□□□ -0.05
SKA3-202ENST00000314759 NBPF5PQ86XG9 351 aaPredicted RBP14.73□□□□□ -0.05
SKA3-202ENST00000314759 DDX42Q86XP3 938 aaKnown RBP eCLIP14.73□□□□□ -0.05
SKA3-202ENST00000314759 DNAAF5Q86Y56 855 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 PROCA1Q8NCQ7 364 aaPredicted RBP14.73□□□□□ -0.05
SKA3-202ENST00000314759 ROBO1Q9Y6N7 1651 aa14.73□□□□□ -0.05
SKA3-202ENST00000314759 NPHP3-ACAD11A0A0J9YXS1 232 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 CES2O00748 559 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 CACNB1Q02641 598 aaPredicted RBP14.72□□□□□ -0.05
SKA3-202ENST00000314759 C6orf89Q6UWU4 347 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 IRF2BP2Q7Z5L9 587 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 BANK1Q8NDB2 785 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 SCFD1Q8WVM8 642 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.72□□□□□ -0.05
SKA3-202ENST00000314759 KCTD10Q9H3F6 313 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 MCM8Q9UJA3 840 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 BTNL10A8MVZ5 291 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 hCG_1984214I3L0E3 225 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 BACH1O14867 736 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 KIF4AO95239 1232 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 ACTN1P12814 892 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 BTDP43251 543 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 USP11P51784 963 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 UBE2SQ16763 222 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 PTPROQ16827 1216 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 PPP4R3AQ6IN85 833 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 LRIG3Q6UXM1 1119 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 ZNF571Q7Z3V5 609 aaPredicted RBP14.72□□□□□ -0.05
SKA3-202ENST00000314759 ZNF713Q8N859 430 aaPredicted RBP14.72□□□□□ -0.05
SKA3-202ENST00000314759 EIF1ADQ8N9N8 165 aaKnown RBP14.72□□□□□ -0.05
SKA3-202ENST00000314759 GIMAP7Q8NHV1 300 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 SETDB2Q96T68 719 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 AP1M1Q9BXS5 423 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 NYXQ9GZU5 481 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 ANKIB1Q9P2G1 1089 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms