RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 MAF1Q9H063 256 aa27.84■■■□□ 2.05
CDPF1-201ENST00000314567 STK24Q9Y6E0 443 aa27.84■■■□□ 2.05
CDPF1-201ENST00000314567 IVNS1ABPQ9Y6Y0 642 aa27.84■■■□□ 2.05
CDPF1-201ENST00000314567 CD44P16070 742 aaKnown RBP27.83■■■□□ 2.05
CDPF1-201ENST00000314567 CTGFP29279 349 aa27.83■■■□□ 2.05
CDPF1-201ENST00000314567 HYIQ5T013 277 aa27.83■■■□□ 2.05
CDPF1-201ENST00000314567 SPATA1Q5VX52 437 aa27.83■■■□□ 2.05
CDPF1-201ENST00000314567 CCDC186Q7Z3E2 898 aa27.83■■■□□ 2.05
CDPF1-201ENST00000314567 LRRC27Q9C0I9 530 aa27.83■■■□□ 2.05
CDPF1-201ENST00000314567 NT5C3AQ9H0P0 336 aa27.83■■■□□ 2.05
CDPF1-201ENST00000314567 JADE2Q9NQC1 790 aa27.83■■■□□ 2.05
CDPF1-201ENST00000314567 KCNH7Q9NS40 1196 aa27.83■■■□□ 2.05
CDPF1-201ENST00000314567 RHOBTB3O94955 611 aa27.83■■■□□ 2.04
CDPF1-201ENST00000314567 ATP1A3P13637 1013 aa27.83■■■□□ 2.04
CDPF1-201ENST00000314567 ZNF18P17022 549 aa27.83■■■□□ 2.04
CDPF1-201ENST00000314567 MAPK4P31152 587 aa27.83■■■□□ 2.04
CDPF1-201ENST00000314567 SV2BQ7L1I2 683 aa27.83■■■□□ 2.04
CDPF1-201ENST00000314567 EEPD1Q7L9B9 569 aa27.83■■■□□ 2.04
CDPF1-201ENST00000314567 TRIM9Q9C026 710 aa27.83■■■□□ 2.04
CDPF1-201ENST00000314567 IMPACTQ9P2X3 320 aa27.83■■■□□ 2.04
CDPF1-201ENST00000314567 LRRC37A2A6NM11 1700 aa27.82■■■□□ 2.04
CDPF1-201ENST00000314567 KLRC4O43908 158 aa27.82■■■□□ 2.04
CDPF1-201ENST00000314567 MTMR1Q13613 665 aa27.82■■■□□ 2.04
CDPF1-201ENST00000314567 LARP4BQ92615 738 aaKnown RBP27.82■■■□□ 2.04
CDPF1-201ENST00000314567 BLOC1S4Q9NUP1 217 aa27.82■■■□□ 2.04
CDPF1-201ENST00000314567 TRPA1O75762 1119 aa27.81■■■□□ 2.04
CDPF1-201ENST00000314567 SERPINC1P01008 464 aa27.81■■■□□ 2.04
CDPF1-201ENST00000314567 GRB14Q14449 540 aa27.81■■■□□ 2.04
CDPF1-201ENST00000314567 TRMT44Q8IYL2 757 aaKnown RBP27.81■■■□□ 2.04
CDPF1-201ENST00000314567 ZNF577Q9BSK1 485 aa27.81■■■□□ 2.04
CDPF1-201ENST00000314567 ARHGAP39Q9C0H5 1083 aa27.81■■■□□ 2.04
CDPF1-201ENST00000314567 ADD3Q9UEY8 706 aaKnown RBP27.81■■■□□ 2.04
CDPF1-201ENST00000314567 ALDH1A1P00352 501 aa27.81■■■□□ 2.04
CDPF1-201ENST00000314567 PTGS1P23219 599 aa27.81■■■□□ 2.04
CDPF1-201ENST00000314567 DHX8Q14562 1220 aaKnown RBP27.81■■■□□ 2.04
CDPF1-201ENST00000314567 KMT5BQ4FZB7 885 aa27.81■■■□□ 2.04
CDPF1-201ENST00000314567 RAD54LQ92698 747 aa27.81■■■□□ 2.04
CDPF1-201ENST00000314567 MED15Q96RN5 788 aa27.81■■■□□ 2.04
CDPF1-201ENST00000314567 IWS1Q96ST2 819 aa27.81■■■□□ 2.04
CDPF1-201ENST00000314567 DOCK5Q9H7D0 1870 aa27.8■■■□□ 2.04
CDPF1-201ENST00000314567 ATP9AO75110 1047 aa27.8■■■□□ 2.04
CDPF1-201ENST00000314567 EDNRBP24530 442 aa27.8■■■□□ 2.04
CDPF1-201ENST00000314567 UBASH3AP57075 661 aa27.8■■■□□ 2.04
CDPF1-201ENST00000314567 SETQ01105 290 aaPredicted RBP27.8■■■□□ 2.04
CDPF1-201ENST00000314567 ZNF792Q3KQV3 632 aa27.8■■■□□ 2.04
CDPF1-201ENST00000314567 SMYD4Q8IYR2 804 aaPredicted RBP27.8■■■□□ 2.04
CDPF1-201ENST00000314567 NUDT12Q9BQG2 462 aa27.8■■■□□ 2.04
CDPF1-201ENST00000314567 RWDD2AQ9UIY3 292 aa27.8■■■□□ 2.04
CDPF1-201ENST00000314567 DDX39AO00148 427 aaKnown RBP27.79■■■□□ 2.04
CDPF1-201ENST00000314567 STRNO43815 780 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 PPP1R2P41236 205 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 SPIRE1Q08AE8 756 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 PAK1Q13153 545 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 ITGB3BPQ13352 177 aaPredicted RBP27.79■■■□□ 2.04
CDPF1-201ENST00000314567 STXBP2Q15833 593 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 HAUS3Q68CZ6 603 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 KLHL10Q6JEL2 608 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 CNNM4Q6P4Q7 775 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 SLC5A5Q92911 643 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 INPP4AQ96PE3 977 aaPredicted RBP27.79■■■□□ 2.04
CDPF1-201ENST00000314567 KCNF1Q9H3M0 494 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 BCAS3Q9H6U6 928 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 AGO4Q9HCK5 861 aaKnown RBP27.79■■■□□ 2.04
CDPF1-201ENST00000314567 RNF186Q9NXI6 227 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 NRBP1Q9UHY1 535 aa27.79■■■□□ 2.04
CDPF1-201ENST00000314567 IPO5O00410 1097 aaKnown RBP27.78■■■□□ 2.04
CDPF1-201ENST00000314567 SORBS3O60504 671 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 MAP2K2P36507 400 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 GSDMDP57764 484 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 CAP1Q01518 475 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 PDE4DQ08499 809 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 STIM1Q13586 685 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 LRCH2Q5VUJ6 765 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 XRRA1Q6P2D8 792 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 DPP9Q86TI2 863 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 ABRAQ8N0Z2 381 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 ZNF830Q96NB3 372 aaPredicted RBP27.78■■■□□ 2.04
CDPF1-201ENST00000314567 RTN4Q9NQC3 1192 aaKnown RBP27.78■■■□□ 2.04
CDPF1-201ENST00000314567 VAV3Q9UKW4 847 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 CTNND2Q9UQB3 1225 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 CCT6AP40227 531 aaKnown RBP27.78■■■□□ 2.04
CDPF1-201ENST00000314567 ASIC1P78348 528 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 SEPT14Q6ZU15 432 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 GIMAP8Q8ND71 665 aaPredicted RBP27.78■■■□□ 2.04
CDPF1-201ENST00000314567 ERMNQ8TAM6 284 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 NPLOC4Q8TAT6 608 aa27.78■■■□□ 2.04
CDPF1-201ENST00000314567 MGAMO43451 1857 aa27.77■■■□□ 2.04
CDPF1-201ENST00000314567 CHMP2AO43633 222 aa27.77■■■□□ 2.04
CDPF1-201ENST00000314567 PSMD10O75832 226 aa27.77■■■□□ 2.04
CDPF1-201ENST00000314567 CDK11BP21127 795 aaKnown RBP27.77■■■□□ 2.04
CDPF1-201ENST00000314567 CCDC144BQ3MJ40 725 aa27.77■■■□□ 2.04
CDPF1-201ENST00000314567 NIPA1Q7RTP0 329 aa27.77■■■□□ 2.04
CDPF1-201ENST00000314567 EXOC1Q9NV70 894 aa27.77■■■□□ 2.04
CDPF1-201ENST00000314567 CENPFP49454 3210 aa27.77■■■□□ 2.04
CDPF1-201ENST00000314567 NCAPH2Q6IBW4 605 aa27.76■■■□□ 2.04
CDPF1-201ENST00000314567 ADSSL1Q8N142 457 aa27.76■■■□□ 2.04
CDPF1-201ENST00000314567 PVALEFA0A1B0GWK0 134 aa27.76■■■□□ 2.03
CDPF1-201ENST00000314567 EML1O00423 815 aa27.76■■■□□ 2.03
CDPF1-201ENST00000314567 GAS7O60861 476 aa27.76■■■□□ 2.03
CDPF1-201ENST00000314567 EIF3JO75822 258 aaKnown RBP27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms