RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 LIMA1Q9UHB6 759 aaKnown RBP18.63■□□□□ 0.57
CLCF1-201ENST00000312438 TRIM49BA6NDI0 452 aa18.62■□□□□ 0.57
CLCF1-201ENST00000312438 CENPPQ6IPU0 288 aa18.62■□□□□ 0.57
CLCF1-201ENST00000312438 RIOX2Q8IUF8 465 aa18.62■□□□□ 0.57
CLCF1-201ENST00000312438 SLC10A4Q96EP9 437 aa18.62■□□□□ 0.57
CLCF1-201ENST00000312438 TRIM47Q96LD4 638 aa18.62■□□□□ 0.57
CLCF1-201ENST00000312438 NACC1Q96RE7 527 aa18.62■□□□□ 0.57
CLCF1-201ENST00000312438 BHMT2Q9H2M3 363 aa18.62■□□□□ 0.57
CLCF1-201ENST00000312438 BTBD7Q9P203 1132 aa18.62■□□□□ 0.57
CLCF1-201ENST00000312438 ADD3Q9UEY8 706 aaKnown RBP18.62■□□□□ 0.57
CLCF1-201ENST00000312438 FRMD3A2A2Y4 597 aa18.61■□□□□ 0.57
CLCF1-201ENST00000312438 ITGB3BPQ13352 177 aaPredicted RBP18.61■□□□□ 0.57
CLCF1-201ENST00000312438 GIT2Q14161 759 aa18.61■□□□□ 0.57
CLCF1-201ENST00000312438 TCP11X2Q5H9J9 407 aa18.61■□□□□ 0.57
CLCF1-201ENST00000312438 ANKRD40Q6AI12 368 aa18.61■□□□□ 0.57
CLCF1-201ENST00000312438 MIER3Q7Z3K6 550 aa18.61■□□□□ 0.57
CLCF1-201ENST00000312438 NLRX1Q86UT6 975 aa18.61■□□□□ 0.57
CLCF1-201ENST00000312438 SRRTQ9BXP5 876 aaKnown RBP18.61■□□□□ 0.57
CLCF1-201ENST00000312438 ASCC2Q9H1I8 757 aaPredicted RBP18.61■□□□□ 0.57
CLCF1-201ENST00000312438 KCNJ18B7U540 433 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 STAM2O75886 525 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 KCNJ12Q14500 433 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 HERC4Q5GLZ8 1057 aaPredicted RBP18.6■□□□□ 0.57
CLCF1-201ENST00000312438 FAM26FQ5R3K3 315 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 MAP1SQ66K74 1059 aaPredicted RBP18.6■□□□□ 0.57
CLCF1-201ENST00000312438 CSGALNACT2Q8N6G5 542 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 CCDC150Q8NCX0 1101 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 GPRASP2Q96D09 838 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 DUSP9Q99956 384 aaKnown RBP18.6■□□□□ 0.57
CLCF1-201ENST00000312438 SPATC1LQ9H0A9 340 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 PKD2L1Q9P0L9 805 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 RLFQ13129 1914 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 SCN4AP35499 1836 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 NPHP3-ACAD11A0A0J9YXS1 232 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 TESPA1A2RU30 521 aaPredicted RBP18.6■□□□□ 0.57
CLCF1-201ENST00000312438 DDX39AO00148 427 aaKnown RBP18.6■□□□□ 0.57
CLCF1-201ENST00000312438 P4HBP07237 508 aaKnown RBP18.6■□□□□ 0.57
CLCF1-201ENST00000312438 OSBPP22059 807 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 EEF1GP26641 437 aaKnown RBP18.6■□□□□ 0.57
CLCF1-201ENST00000312438 LRMPQ12912 555 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 KRT31Q15323 416 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 SPECC1LQ69YQ0 1117 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 IRF2BP1Q8IU81 584 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 ANKRD35Q8N283 1001 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 DNERQ8NFT8 737 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 KIAA1524Q8TCG1 905 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 INPP4AQ96PE3 977 aaPredicted RBP18.6■□□□□ 0.57
CLCF1-201ENST00000312438 IWS1Q96ST2 819 aa18.6■□□□□ 0.57
CLCF1-201ENST00000312438 RTN4Q9NQC3 1192 aaKnown RBP18.6■□□□□ 0.57
CLCF1-201ENST00000312438 KIF20AO95235 890 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 POTEJP0CG39 1038 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 HERVK_113P62684 666 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 SNAPC2Q13487 334 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 MOGSQ13724 837 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 ARID5BQ14865 1188 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 RINT1Q6NUQ1 792 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 FOXR2Q6PJQ5 311 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 MYOCDQ8IZQ8 938 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 PIGOQ8TEQ8 1089 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 SEMA6BQ9H3T3 888 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 MAGEC2Q9UBF1 373 aaPredicted RBP18.59■□□□□ 0.57
CLCF1-201ENST00000312438 PCDHA2Q9Y5H9 948 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 PFASO15067 1338 aa18.59■□□□□ 0.57
CLCF1-201ENST00000312438 ATP9AO75110 1047 aa18.58■□□□□ 0.57
CLCF1-201ENST00000312438 LRRC63Q05C16 580 aa18.58■□□□□ 0.57
CLCF1-201ENST00000312438 CREBRFQ8IUR6 639 aa18.58■□□□□ 0.57
CLCF1-201ENST00000312438 FAM114A1Q8IWE2 563 aa18.58■□□□□ 0.57
CLCF1-201ENST00000312438 CDHR1Q96JP9 859 aa18.58■□□□□ 0.57
CLCF1-201ENST00000312438 ZSWIM4Q9H7M6 989 aa18.58■□□□□ 0.57
CLCF1-201ENST00000312438 PYCARDQ9ULZ3 195 aa18.58■□□□□ 0.57
CLCF1-201ENST00000312438 PAPPA2Q9BXP8 1791 aa18.58■□□□□ 0.57
CLCF1-201ENST00000312438 TRAF5O00463 557 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 N4BP3O15049 544 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 FGFR1OPO95684 399 aaKnown RBP18.58■□□□□ 0.56
CLCF1-201ENST00000312438 SLC25A27O95847 323 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 SFPQP23246 707 aaKnown RBP eCLIP18.58■□□□□ 0.56
CLCF1-201ENST00000312438 SFNP31947 248 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 COPB1P53618 953 aaKnown RBP18.58■□□□□ 0.56
CLCF1-201ENST00000312438 FKBP1BP68106 108 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 KRT76Q01546 638 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.56
CLCF1-201ENST00000312438 RAD51AP2Q09MP3 1159 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 REEP2Q9BRK0 252 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 LXNQ9BS40 222 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 ZNF408Q9H9D4 720 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 KCND2Q9NZV8 630 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 TCEAL9Q9UHQ7 104 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 SAMM50Q9Y512 469 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 PARP14Q460N5 1801 aa18.58■□□□□ 0.56
CLCF1-201ENST00000312438 WDR90Q96KV7 1748 aa18.57■□□□□ 0.56
CLCF1-201ENST00000312438 TEX33O43247 280 aa18.57■□□□□ 0.56
CLCF1-201ENST00000312438 JAK3P52333 1124 aa18.57■□□□□ 0.56
CLCF1-201ENST00000312438 TBX2Q13207 712 aaPredicted RBP18.57■□□□□ 0.56
CLCF1-201ENST00000312438 NOLC1Q14978 699 aaKnown RBP eCLIP18.57■□□□□ 0.56
CLCF1-201ENST00000312438 LRRC41Q15345 812 aa18.57■□□□□ 0.56
CLCF1-201ENST00000312438 GPAT2Q6NUI2 795 aa18.57■□□□□ 0.56
CLCF1-201ENST00000312438 ARMCX5Q6P1M9 558 aa18.57■□□□□ 0.56
CLCF1-201ENST00000312438 C1orf186Q6ZWK4 172 aa18.57■□□□□ 0.56
CLCF1-201ENST00000312438 NCAPG2Q86XI2 1143 aa18.57■□□□□ 0.56
CLCF1-201ENST00000312438 BANK1Q8NDB2 785 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms