RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 VCANP13611 3396 aa22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 MEIS1O00470 390 aa22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 TREHO43280 583 aa22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 TCF7P36402 384 aaPredicted RBP22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 CCT2P78371 535 aaKnown RBP22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 ITGB3BPQ13352 177 aaPredicted RBP22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 MKRN4PQ13434 485 aaPredicted RBP22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 CEP55Q53EZ4 464 aa22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 CCDC155Q8N6L0 562 aa22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 IL17RAQ96F46 866 aa22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 OSBPL7Q9BZF2 842 aa22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 MTIF3Q9H2K0 278 aaKnown RBP22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 PKD2L1Q9P0L9 805 aa22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 SLC4A7Q9Y6M7 1214 aa22.67■■□□□ 1.22
PDZRN3-202ENST00000308537 MICAL3Q7RTP6 2002 aa22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 IGLV3-22A0A075B6J6 115 aa22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 C17orf102A2RUQ5 167 aa22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 FAM86B1E9PN63 330 aa22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 FAM86B2P0C5J1 330 aa22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 RABGGTBP53611 331 aa22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 UTP14CQ5TAP6 766 aaKnown RBP22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 LARP6Q9BRS8 491 aaKnown RBP22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 GLT8D2Q9H1C3 349 aa22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 SETD4Q9NVD3 440 aa22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 CYP46A1Q9Y6A2 500 aa22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 SPTBN5Q9NRC6 3674 aaKnown RBP22.66■■□□□ 1.22
PDZRN3-202ENST00000308537 NFASCO94856 1347 aa22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 LGR5O75473 907 aa22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 CYP3A4P08684 503 aa22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 MYOGP15173 224 aa22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 ARHGAP4P98171 946 aa22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 JAKMIP3Q5VZ66 844 aa22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 LMBR1Q8WVP7 490 aa22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 SEPT1Q8WYJ6 367 aa22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 ATP6V0A1Q93050 837 aa22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 ZNF274Q96GC6 653 aaPredicted RBP22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 EHMT1Q9H9B1 1298 aa22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 AGO4Q9HCK5 861 aaKnown RBP22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 TRANK1O15050 2925 aa22.65■■□□□ 1.22
PDZRN3-202ENST00000308537 EMSYQ7Z589 1322 aa22.64■■□□□ 1.22
PDZRN3-202ENST00000308537 ZBBXA8MT70 800 aa22.64■■□□□ 1.21
PDZRN3-202ENST00000308537 ATP2A2P16615 1042 aaKnown RBP22.64■■□□□ 1.21
PDZRN3-202ENST00000308537 RAB30Q15771 203 aa22.64■■□□□ 1.21
PDZRN3-202ENST00000308537 NKX2-4Q9H2Z4 354 aa22.64■■□□□ 1.21
PDZRN3-202ENST00000308537 WDR81Q562E7 1941 aa22.64■■□□□ 1.21
PDZRN3-202ENST00000308537 DHX15O43143 795 aaKnown RBP22.63■■□□□ 1.21
PDZRN3-202ENST00000308537 BAIAP3O94812 1187 aa22.63■■□□□ 1.21
PDZRN3-202ENST00000308537 ARHGEF15O94989 841 aa22.63■■□□□ 1.21
PDZRN3-202ENST00000308537 PARNO95453 639 aaKnown RBP22.63■■□□□ 1.21
PDZRN3-202ENST00000308537 NIPA1Q7RTP0 329 aa22.63■■□□□ 1.21
PDZRN3-202ENST00000308537 RASGRP4Q8TDF6 673 aa22.63■■□□□ 1.21
PDZRN3-202ENST00000308537 SLC26A6Q9BXS9 759 aa22.63■■□□□ 1.21
PDZRN3-202ENST00000308537 JPH1Q9HDC5 661 aaPredicted RBP22.63■■□□□ 1.21
PDZRN3-202ENST00000308537 VPS54Q9P1Q0 977 aa22.63■■□□□ 1.21
PDZRN3-202ENST00000308537 ZNF215Q9UL58 517 aaPredicted RBP22.63■■□□□ 1.21
PDZRN3-202ENST00000308537 PCDHA11Q9Y5I1 949 aa22.63■■□□□ 1.21
PDZRN3-202ENST00000308537 ATG7O95352 703 aa22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 CCNE2O96020 404 aa22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 ACTN1P12814 892 aa22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 WDR5P61964 334 aaKnown RBP22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 NPY5RQ15761 445 aa22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 MARCH8Q5T0T0 291 aa22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 CNKSR3Q6P9H4 555 aa22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 REXO1Q8N1G1 1221 aaKnown RBP22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 PHOSPHO2Q8TCD6 241 aa22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 SLC9A7Q96T83 725 aa22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 FTOQ9C0B1 505 aaKnown RBP eCLIP22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 SLC9A2Q9UBY0 812 aa22.62■■□□□ 1.21
PDZRN3-202ENST00000308537 IGKV6D-21A0A0A0MT36 114 aa22.61■■□□□ 1.21
PDZRN3-202ENST00000308537 THPOP40225 353 aa22.61■■□□□ 1.21
PDZRN3-202ENST00000308537 LENG9Q96B70 501 aa22.61■■□□□ 1.21
PDZRN3-202ENST00000308537 C6orf50Q9HD87 102 aa22.61■■□□□ 1.21
PDZRN3-202ENST00000308537 MSRAQ9UJ68 235 aa22.61■■□□□ 1.21
PDZRN3-202ENST00000308537 NRCAMQ92823 1304 aa22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 MBLAC1A4D2B0 266 aaPredicted RBP22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 ANAPC15P60006 121 aa22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 ACTR2P61160 394 aa22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 DEFB103AP81534 67 aa22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 ADGRE1Q14246 886 aa22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 RUFY4Q6ZNE9 571 aa22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 HERC6Q8IVU3 1022 aa22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 CCDC12Q8WUD4 166 aaPredicted RBP22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 PDRG1Q9NUG6 133 aa22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 ERAP1Q9NZ08 941 aa22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 REV3LO60673 3130 aa22.6■■□□□ 1.21
PDZRN3-202ENST00000308537 RSPH10B2B2RC85 870 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 M0R2N6 131 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 CAND2O75155 1236 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 SEC24BO95487 1268 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 RSPH10BP0C881 870 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 FOSL2P15408 326 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 MARK3P27448 753 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 GNA11P29992 359 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 CIITAP33076 1130 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 PLEKHG4Q58EX7 1191 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 FAM26DQ5JW98 314 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 TMCO2Q7Z6W1 182 aaPredicted RBP22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 RPAINQ86UA6 219 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 MAFAQ8NHW3 353 aaPredicted RBP22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 AIFM3Q96NN9 605 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms